chr7 : 29,128,296 29,129,278
982 bp 36 TFs 2 linked genes
This 982 bp open chromatin element is linked to CPVL and CHN2 and is bound by 36 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
CPVL 17.6 kb Distal Multiome
CHN2 17.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:29,123,296 – 29,134,278
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP NMC24335 GSE96775.BRD4.NMC24335 270 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 547 bp overlap
E2F8 1 dataset
Motif DE_60h DE_60h-E2F8_MA0865.3 9 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 179 bp overlap
ChIP hESC GSE26097.EOMES.hESC 391 bp overlap
FOXA1 2 datasets
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 287 bp overlap
FOXA2 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 234 bp overlap
ChIP DE DE-FOXA2-1 982 bp overlap
ChIP DE DE-FOXA2-2 965 bp overlap
ChIP HepG2 ENCFF533COJ 297 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 379 bp overlap
GATA1 2 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 77 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 110 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 982 bp overlap
ChIP DE DE-GATA4-2 982 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 320 bp overlap
ChIP foregut GSE117136.GATA4.foregut 179 bp overlap
ChIP foregut GSE117136.GATA4.foregut 556 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 482 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 371 bp overlap
GATA6 12 datasets
ChIP AGS GSE51705.GATA6.AGS 132 bp overlap
ChIP DE DE-GATA6-1 982 bp overlap
ChIP DE DE-GATA6-2 982 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 282 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 982 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 384 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 199 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 531 bp overlap
ChIP foregut GSE117136.GATA6.foregut 249 bp overlap
ChIP foregut GSE117136.GATA6.foregut 579 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 431 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 276 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 156 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 261 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 51 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 443 bp overlap
ONECUT1 4 datasets
ChIP H9 ERP004206.ONECUT1.H9 139 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 129 bp overlap
ChIP HepG2 ENCFF243FIR 227 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 213 bp overlap
ONECUT2 1 dataset
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 167 bp overlap
PATZ1 1 dataset
Motif DE_60h DE_60h-PATZ1_MA1961.2 11 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 207 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 301 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 508 bp overlap
SMAD2_3 3 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 195 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 485 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 982 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 250 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 187 bp overlap
SOX17 2 datasets
ChIP DE_D2 DED2-SOX17_Batch_II 284 bp overlap
ChIP DE_D2 DED2-SOX17_Batch_II 402 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 948 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 500 bp overlap
SP1 1 dataset
Motif DE_60h DE_60h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_60h DE_60h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_60h DE_60h-SP3_MA0746.3 11 bp overlap
SP5 1 dataset
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 217 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 174 bp overlap
TP53 1 dataset
ChIP IMR-90_SENES_SHLUC GSE42728.TP53.IMR-90_SENES_SHLUC 128 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 337 bp overlap
ZNF121 2 datasets
ChIP HEK293 ENCFF839FUF 441 bp overlap
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 256 bp overlap
ZNF425 1 dataset
ChIP HEK293T GSE78099.ZNF425.HEK293T 136 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 410 bp overlap