chr6 : 169,252,910 169,253,104
194 bp 37 TFs 1 linked gene
This 194 bp open chromatin element is linked to THBS2 and is bound by 37 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
THBS2 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:169,247,910 – 169,258,104
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 194 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 194 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 194 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 190 bp overlap
BRD4 3 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 194 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 112 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 118 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 173 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT_adipocyte GSE89179.CHD1.hMSC-TERT_adipocyte 194 bp overlap
CLOCK 1 dataset
ChIP BA40_0 GSE96659.CLOCK.BA40_0 110 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 194 bp overlap
EZH2 4 datasets
ChIP A673 ENCFF955JRZ 175 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 194 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 194 bp overlap
ChIP hepatocyte ENCFF552DZB 194 bp overlap
GATA6 3 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 95 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 194 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 158 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 128 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 194 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 155 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 194 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 123 bp overlap
ChIP H1 ENCFF747ZPQ 182 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 163 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 189 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 194 bp overlap
ChIP hESC GSE18292.NANOG.hESC 110 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 194 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 194 bp overlap
POU5F1 9 datasets
ChIP BG03 GSE21614.POU5F1.BG03 177 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 194 bp overlap
ChIP GM23338 ENCFF333SNB 194 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 194 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 194 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 185 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 194 bp overlap
ChIP hiPSC GSE149017.POU5F1.hiPSC 179 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 175 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 57 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 194 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 194 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 194 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 194 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 136 bp overlap
SATB1 1 dataset
ChIP MCF-10A_dHD GSE123292.SATB1.MCF-10A_dHD 142 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 121 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 118 bp overlap
SMAD2 1 dataset
ChIP hESC GSE29422.SMAD2.hESC 116 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 103 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 194 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 194 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 194 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 170 bp overlap
SMARCA4 3 datasets
ChIP NSC GSE125033.SMARCA4.NSC 190 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 194 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 194 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 194 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 194 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 194 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 194 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 194 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 173 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 180 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 194 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 136 bp overlap
ChIP WTC11 ENCFF688PEU 194 bp overlap
STAT3 1 dataset
ChIP OCI-Ly10 GSE106844.STAT3.OCI-Ly10 139 bp overlap
SUZ12 1 dataset
ChIP hiPSC GSE124903.SUZ12.hiPSC 194 bp overlap
TBP 1 dataset
ChIP hESC_8h GSE122298.TBP.hESC_8h 110 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 181 bp overlap