chr6 : 132,823,548 132,823,914
366 bp 35 TFs 3 linked genes
This 366 bp open chromatin element is linked to SNORA33, SNORD101, and RPS12 and is bound by 35 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
SNORA33 6.3 kb Proximal Proximity
SNORD101 8.2 kb Proximal Proximity
RPS12 9.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:132,818,548 – 132,828,914
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 120 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 101 bp overlap
CTCF 13 datasets
ChIP B cell ENCFF500PZO 100 bp overlap
ChIP C4-2B ENCFF821XVN 56 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 130 bp overlap
ChIP RWPE2 ENCFF911IEE 57 bp overlap
ChIP brain ENCFF099ASU 89 bp overlap
ChIP chondrocyte ENCFF134ORZ 58 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF311KBD 53 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 83 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 89 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 81 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 107 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 51 bp overlap
ChIP natural killer cell ENCFF517SNI 101 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
E4F1 1 dataset
ChIP K562 ENCFF622HMZ 128 bp overlap
ELF4 1 dataset
ChIP K562 ENCFF454SBL 69 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
HMGXB4 1 dataset
ChIP HepG2 ENCFF032DND 366 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
POLR2A 1 dataset
ChIP HepG2 ENCFF350RIU 254 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 229 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA1555.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA1556.1 14 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 63 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 85 bp overlap
ZEB2 1 dataset
ChIP K562 ENCFF795CMH 130 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF213 2 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 223 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 88 bp overlap
ZNF384 2 datasets
ChIP HEK293T ENCFF019DZX 147 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 78 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
ZNF85 1 dataset
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap