chr6 : 61,578,365 – 61,579,549
1,184 bp 34 TFs 0 linked genes
This 1.2 kb open chromatin element has no linked target genes and is bound by 34 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:61,573,365 – 61,584,549
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
AR 18 datasets
ChIP LHSAR_HOXB13 GSE56288.AR.LHSAR_HOXB13 344 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 350 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 191 bp overlap
ChIP MDA-MB-453 ERP001226.AR.MDA-MB-453 191 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 167 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 138 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 170 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 260 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 232 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 185 bp overlap
ChIP VCaP_shCt GSE110655.AR.VCaP_shCt 164 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 450 bp overlap
ChIP VCaP_siBCOR-EtOH GSE122572.AR.VCaP_siBCOR-EtOH 320 bp overlap
ChIP VCaP_siNON-EtOH GSE122572.AR.VCaP_siNON-EtOH 360 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 212 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 597 bp overlap
ChIP prostate_1636_T GSE130408.AR.prostate_1636_T 216 bp overlap
ChIP prostate_P29_T GSE130408.AR.prostate_P29_T 270 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 360 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 453 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1_UV GSE103125.BCL6.OCI-Ly1_UV 94 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 307 bp overlap
CBX5 1 dataset
ChIP HCT-116 GSE135580.CBX5.HCT-116 296 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 640 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 171 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 291 bp overlap
ERF 2 datasets
ChIP VCaP GSE98809.ERF.VCaP 312 bp overlap
ChIP VCaP_DOX GSE98809.ERF.VCaP_DOX 536 bp overlap
ERG 4 datasets
ChIP VCaP GSE83650.ERG.VCaP 304 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 304 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 451 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 390 bp overlap
ESR1 31 datasets
ChIP MCF-7 GSE48930.ESR1.MCF-7 192 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 206 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 164 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 213 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 165 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 196 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 155 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 196 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 158 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 201 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 237 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 216 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 215 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 219 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 186 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 180 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 247 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 302 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 308 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 244 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 326 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 299 bp overlap
ChIP MCF-7_jc5853 GSE126004.ESR1.MCF-7_jc5853 250 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 211 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 152 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 195 bp overlap
ChIP breast_tumor_Male_13 GSE104399.ESR1.breast_tumor_Male_13 160 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 215 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 250 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_F GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_F 208 bp overlap
ChIP pleural-effusion GSE86538.ESR1.pleural-effusion 293 bp overlap
EZH2 1 dataset
ChIP PC-9 ENCSR793USK.EZH2.PC-9 318 bp overlap
EZH2_phosphoT487 2 datasets
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 230 bp overlap
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 274 bp overlap
FOS 1 dataset
ChIP myometrium_PT1063 GSE128230.FOS.myometrium_PT1063 57 bp overlap
FOXA1 47 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 252 bp overlap
ChIP 22Rv1 GSE85558.FOXA1.22Rv1 185 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 279 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 195 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 198 bp overlap
ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 110 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 186 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 195 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 530 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 199 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 110 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 184 bp overlap
ChIP MCF-7 ENCFF465LTH 197 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 329 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 238 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 215 bp overlap
ChIP MCF-7 GSE95302.FOXA1.MCF-7 208 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 155 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 207 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 215 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 275 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 230 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 149 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 252 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 211 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 217 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 237 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 333 bp overlap
ChIP MCF-7_siFEN1 GSE95302.FOXA1.MCF-7_siFEN1 238 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 269 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 223 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 437 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 333 bp overlap
ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 288 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 301 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 277 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 322 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 237 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 184 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 199 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 298 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 179 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 292 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 158 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 137 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 187 bp overlap
ChIP prostate_P29_T GSE130408.FOXA1.prostate_P29_T 120 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 786 bp overlap
ChIP DE DE-FOXA2-2 908 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 157 bp overlap
GATA2 5 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 86 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 86 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 156 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 334 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 307 bp overlap
GATA3 1 dataset
ChIP MCF-7 ENCFF352QVM 143 bp overlap
GATA4 2 datasets
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 425 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 202 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-2 407 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 611 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 639 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 531 bp overlap
HOXB13 21 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 178 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 612 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 348 bp overlap
ChIP prostate_2030 GSE130408.HOXB13.prostate_2030 346 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 337 bp overlap
ChIP prostate_2480 GSE130408.HOXB13.prostate_2480 329 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 506 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 276 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 523 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 220 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 445 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 154 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 247 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 388 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 385 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 326 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 286 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 294 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 457 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 237 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 145 bp overlap
LDB1 1 dataset
ChIP H9_DOX-0 GSE137670.LDB1.H9_DOX-0 121 bp overlap
MED12 2 datasets
ChIP leiomyoma_PT1063 GSE128230.MED12.leiomyoma_PT1063 82 bp overlap
ChIP myometrium_PT967 GSE128230.MED12.myometrium_PT967 63 bp overlap
NR3C1 1 dataset
ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 212 bp overlap
PGR 1 dataset
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 244 bp overlap
PKNOX1 1 dataset
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 116 bp overlap
POLR2A 1 dataset
ChIP sigmoid colon ENCFF748YVT 147 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 161 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 343 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 357 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 310 bp overlap
SPI1 1 dataset
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 241 bp overlap
STAT3 1 dataset
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 151 bp overlap
ZBTB40 1 dataset
ChIP MCF-7 ENCSR318LVG.ZBTB40.MCF-7 58 bp overlap
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