chr5 : 154,219,306 – 154,219,800

494 bp 58 TFs 0 linked genes

This 494 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

58 transcription factors

AR 1 dataset

ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 221 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 106 bp overlap

Ahr::Arnt 2 datasets

Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap

Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap

EGR4 1 dataset

Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap

ELF2 1 dataset

Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap

ERF::FOXO1 1 dataset

Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap

ESR1 4 datasets

ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 218 bp overlap

ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 123 bp overlap

ChIP MCF-7_LTED_E2 GSE86538.ESR1.MCF-7_LTED_E2 122 bp overlap

ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 246 bp overlap

ETV1 1 dataset

Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap

ETV6 1 dataset

ChIP WTC11 ENCFF812SCD 376 bp overlap

FIGLA 2 datasets

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOXA1 3 datasets

Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap

Motif ES_0h ES_0h-FOXA1_MA0148.5 8 bp overlap

ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 152 bp overlap

FOXJ2::ELF1 1 dataset

Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap

FOXP1 1 dataset

ChIP WTC11 ENCFF338WGC 304 bp overlap

GATA1::TAL1 1 dataset

Motif DE_12h DE_12h-GATA1TAL1_MA0140.3 17 bp overlap

GTF2B 1 dataset

ChIP IMR-90_TERT GSE38303.GTF2B.IMR-90_TERT 140 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 227 bp overlap

Gli1 1 dataset

Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap

Gli2 1 dataset

Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap

HAND2 1 dataset

Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap

HOXC13 2 datasets

Motif DE_12h DE_12h-HOXC13_MA0907.2 9 bp overlap

Motif ES_0h ES_0h-HOXC13_MA0907.2 9 bp overlap

HSF1 1 dataset

Motif DE_12h DE_12h-HSF1_MA0486.2 13 bp overlap

HSF2 1 dataset

Motif DE_12h DE_12h-HSF2_MA0770.1 13 bp overlap

IKZF2 1 dataset

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

Ikzf3 1 dataset

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

KLF11 2 datasets

Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap

Motif ES_0h ES_0h-KLF11_MA1512.2 10 bp overlap

KLF4 4 datasets

ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 123 bp overlap

ChIP HAP1 GSE130417.KLF4.HAP1 202 bp overlap

ChIP WA09 GSE105028.KLF4.WA09 233 bp overlap

ChIP hiPSC GSE56567.KLF4.hiPSC 197 bp overlap

KLF6 2 datasets

Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap

Motif ES_0h ES_0h-KLF6_MA1517.2 9 bp overlap

MAF 1 dataset

Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap

MAFF 1 dataset

Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap

MED1 2 datasets

ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 111 bp overlap

ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 72 bp overlap

Mafb 1 dataset

Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap

NANOG 4 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 284 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 176 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 173 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 256 bp overlap

NEUROD1 1 dataset

Motif ES_0h ES_0h-NEUROD1_MA1109.2 8 bp overlap

NFIB 1 dataset

Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap

Neurod2 1 dataset

Motif ES_0h ES_0h-Neurod2_MA0668.3 8 bp overlap

PLAG1 1 dataset

ChIP K-562 GSE111469.PLAG1.K-562 155 bp overlap

POU4F2 2 datasets

Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap

Motif ES_0h ES_0h-POU4F2_MA0683.2 15 bp overlap

POU5F1 14 datasets

ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 203 bp overlap

ChIP H1 ENCFF698ZAP 185 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 375 bp overlap

ChIP NCCIT GSE36134.POU5F1.NCCIT 322 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 387 bp overlap

ChIP SKM-1 GSE93706.POU5F1.SKM-1 68 bp overlap

ChIP SKM-1 GSE93706.POU5F1.SKM-1 219 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 195 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 208 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 184 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 379 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 335 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 308 bp overlap

ChIP hiPSC GSE149017.POU5F1.hiPSC 207 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 366 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Prdm15 1 dataset

Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap

Ptf1A 1 dataset

Motif ES_0h ES_0h-Ptf1A_MA1618.2 9 bp overlap

RELB 1 dataset

Motif DE_12h DE_12h-RELB_MA1117.2 7 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 152 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 171 bp overlap

SMARCC1 1 dataset

ChIP hiPSC GSE124903.SMARCC1.hiPSC 64 bp overlap

SOX2 3 datasets

ChIP NCI-H520 GSE137459.SOX2.NCI-H520 347 bp overlap

ChIP hESC GSE18292.SOX2.hESC 95 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 330 bp overlap

Spz1 1 dataset

Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap

ZBTB26 1 dataset

Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap

ZBTB33 1 dataset

ChIP WTC11 ENCFF048CFR 56 bp overlap

ZEB1 2 datasets

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZNF143 2 datasets

ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 129 bp overlap

ChIP HeLa GSE39263.ZNF143.HeLa 86 bp overlap

ZNF319 2 datasets

ChIP K-562 ENCSR231PDA.ZNF319.K-562 75 bp overlap

ChIP K562 ENCFF561ZSB 110 bp overlap

ZNF416 1 dataset

Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap

ZNF784 1 dataset

Motif ES_0h ES_0h-ZNF784_MA1717.2 8 bp overlap

ZSCAN4 3 datasets

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap

ChIP HEK293 ENCFF381BKT 151 bp overlap

ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 79 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap