chr5 : 112,034,481 – 112,034,954
473 bp 70 TFs 0 linked genes
This 473 bp open chromatin element has no linked target genes and is bound by 70 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:112,029,481 – 112,039,954
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
AR 10 datasets
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 195 bp overlap
ChIP prostate GSE56288.AR.prostate 347 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 205 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 374 bp overlap
ChIP prostate_P1 GSE130408.AR.prostate_P1 291 bp overlap
ChIP prostate_P1_T GSE130408.AR.prostate_P1_T 143 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 334 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 390 bp overlap
ChIP prostate_P27_T GSE130408.AR.prostate_P27_T 357 bp overlap
ChIP prostate_P29_T GSE130408.AR.prostate_P29_T 275 bp overlap
BHLHE22 2 datasets
Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
Bhlha15 2 datasets
Motif DE_36h DE_36h-Bhlha15_MA1472.3 8 bp overlap
Motif DE_60h DE_60h-Bhlha15_MA1472.3 8 bp overlap
CDX1 2 datasets
Motif DE_36h DE_36h-CDX1_MA0878.3 10 bp overlap
Motif DE_60h DE_60h-CDX1_MA0878.3 10 bp overlap
CDX2 2 datasets
Motif DE_36h DE_36h-CDX2_MA0465.3 8 bp overlap
Motif DE_60h DE_60h-CDX2_MA0465.3 8 bp overlap
CDX4 2 datasets
Motif DE_36h DE_36h-CDX4_MA1473.2 9 bp overlap
Motif DE_60h DE_60h-CDX4_MA1473.2 9 bp overlap
CEBPA 3 datasets
Motif DE_36h DE_36h-CEBPA_MA0102.5 10 bp overlap
Motif DE_48h DE_48h-CEBPA_MA0102.5 10 bp overlap
Motif DE_60h DE_60h-CEBPA_MA0102.5 10 bp overlap
CEBPD 3 datasets
Motif DE_36h DE_36h-CEBPD_MA0836.3 8 bp overlap
Motif DE_48h DE_48h-CEBPD_MA0836.3 8 bp overlap
Motif DE_60h DE_60h-CEBPD_MA0836.3 8 bp overlap
ELK1::HOXB13 2 datasets
Motif DE_36h DE_36h-ELK1HOXB13_MA1932.2 15 bp overlap
Motif DE_60h DE_60h-ELK1HOXB13_MA1932.2 15 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 394 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 185 bp overlap
ERF::HOXB13 2 datasets
Motif DE_36h DE_36h-ERFHOXB13_MA1937.2 13 bp overlap
Motif DE_60h DE_60h-ERFHOXB13_MA1937.2 13 bp overlap
ETV5::DRGX 2 datasets
Motif DE_36h DE_36h-ETV5DRGX_MA1944.2 12 bp overlap
Motif DE_60h DE_60h-ETV5DRGX_MA1944.2 12 bp overlap
FERD3L 2 datasets
Motif DE_36h DE_36h-FERD3L_MA1485.1 14 bp overlap
Motif DE_60h DE_60h-FERD3L_MA1485.1 14 bp overlap
FOXA1 3 datasets
ChIP LNCaP GSE64656.FOXA1.LNCaP 64 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 206 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 303 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 467 bp overlap
ChIP DE DE-FOXA2-2 473 bp overlap
FOXF1 1 dataset
ChIP GIST48 GSE106624.FOXF1.GIST48 170 bp overlap
Foxq1 2 datasets
Motif DE_36h DE_36h-Foxq1_MA0040.2 10 bp overlap
Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 473 bp overlap
ChIP DE DE-GATA4-2 473 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 473 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 339 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 432 bp overlap
ChIP DE DE-GATA6-2 473 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 411 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 357 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 335 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 411 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 364 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 380 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 347 bp overlap
ChIP foregut GSE117136.GATA6.foregut 310 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 296 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 386 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 199 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 267 bp overlap
HOXA10 2 datasets
Motif DE_36h DE_36h-HOXA10_MA0899.2 9 bp overlap
Motif DE_60h DE_60h-HOXA10_MA0899.2 9 bp overlap
HOXB2::ELK1 2 datasets
Motif DE_36h DE_36h-HOXB2ELK1_MA1957.1 14 bp overlap
Motif DE_60h DE_60h-HOXB2ELK1_MA1957.1 14 bp overlap
HOXD12::ELK1 2 datasets
Motif DE_36h DE_36h-HOXD12ELK1_MA1958.2 13 bp overlap
Motif DE_60h DE_60h-HOXD12ELK1_MA1958.2 13 bp overlap
HOXD9 2 datasets
Motif DE_36h DE_36h-HOXD9_MA0913.3 9 bp overlap
Motif DE_60h DE_60h-HOXD9_MA0913.3 9 bp overlap
Hnf1A 1 dataset
Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap
Lef1 1 dataset
Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap
MAFF 4 datasets
ChIP HeLa-S3 ENCFF783SBT 276 bp overlap
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 232 bp overlap
ChIP HepG2 ENCFF452YUT 277 bp overlap
ChIP K-562 ENCSR000EGI.MAFF.K-562 175 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 359 bp overlap
ChIP K562 ENCFF455EEO 371 bp overlap
MAFK 13 datasets
ChIP A549 ENCFF371EPR 255 bp overlap
ChIP GM12878 ENCFF605LFT 265 bp overlap
ChIP H1 ENCFF854XWE 285 bp overlap
ChIP HeLa-S3 ENCSR000ECK.MAFK.HeLa-S3 178 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 254 bp overlap
ChIP HepG2 ENCFF743ZOF 241 bp overlap
ChIP HepG2 ENCFF767LDG 257 bp overlap
ChIP IMR-90 ENCFF336DHZ 201 bp overlap
ChIP K-562 ENCSR000EGX.MAFK.K-562 170 bp overlap
ChIP K562 ENCFF380WHM 281 bp overlap
ChIP MCF-7 ENCFF558JLG 334 bp overlap
ChIP MCF-7 ENCSR555PBN.MAFK.MCF-7 322 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 246 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_adipocyte-D14 GSE113253.MED1.hMSC-TERT4_adipocyte-D14 180 bp overlap
MYF5 2 datasets
Motif DE_36h DE_36h-MYF5_MA1641.2 8 bp overlap
Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap
Mecom 3 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NEUROD1 2 datasets
Motif DE_36h DE_36h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap
NHLH2 2 datasets
Motif DE_36h DE_36h-NHLH2_MA1529.2 16 bp overlap
Motif DE_60h DE_60h-NHLH2_MA1529.2 16 bp overlap
Neurod2 4 datasets
Motif DE_36h DE_36h-Neurod2_MA0668.3 8 bp overlap
Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap
Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
Nr2e3 1 dataset
Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap
Olig2 2 datasets
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
PRDM9 2 datasets
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
Pparg::Rxra 2 datasets
Motif DE_36h DE_36h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap
Prdm14 2 datasets
Motif DE_36h DE_36h-Prdm14_MA1998.2 8 bp overlap
Motif DE_60h DE_60h-Prdm14_MA1998.2 8 bp overlap
Prdm5 2 datasets
Motif DE_36h DE_36h-Prdm5_MA1999.2 11 bp overlap
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
Ptf1A 2 datasets
Motif DE_36h DE_36h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap
Runx1 1 dataset
Motif DE_60h DE_60h-Runx1_MA0002.3 9 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 349 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 319 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 332 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 390 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 179 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 166 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 93 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 221 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 262 bp overlap
SPIB 1 dataset
Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap
Spi1 1 dataset
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
TCF7 1 dataset
Motif DE_60h DE_60h-TCF7_MA0769.3 7 bp overlap
TCF7L2 1 dataset
Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap
TEAD4 1 dataset
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 217 bp overlap
TFAP4::FLI1 1 dataset
Motif DE_60h DE_60h-TFAP4FLI1_MA1967.2 14 bp overlap
Tcf12 2 datasets
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
VEZF1 2 datasets
Motif DE_36h DE_36h-VEZF1_MA1578.2 6 bp overlap
Motif DE_60h DE_60h-VEZF1_MA1578.2 6 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 149 bp overlap
ZBTB18 2 datasets
Motif DE_36h DE_36h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_60h DE_60h-ZBTB18_MA0698.2 11 bp overlap
ZFP14 3 datasets
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
Motif DE_48h DE_48h-ZFP14_MA1972.1 15 bp overlap
Motif DE_60h DE_60h-ZFP14_MA1972.1 15 bp overlap
ZIC4 2 datasets
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 182 bp overlap
ZNF530 2 datasets
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap
ZNF582 2 datasets
Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap
Motif DE_60h DE_60h-ZNF582_MA1983.2 19 bp overlap
Zfp809 2 datasets
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap
Zic2 2 datasets
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
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