chr4 : 165,331,460 – 165,331,622
162 bp 33 TFs 1 linked gene
This 162 bp open chromatin element is linked to MSMO1 and is bound by 33 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MSMO1 3.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:165,326,460 – 165,336,622
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
BATF3 1 dataset
ChIP KK-1_BirA GSE94732.BATF3.KK-1_BirA 162 bp overlap
BCL11A 2 datasets
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 78 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 98 bp overlap
CHD1 2 datasets
ChIP K-562 ENCSR000AQD.CHD1.K-562 94 bp overlap
ChIP K562 ENCFF118VJV 162 bp overlap
CTCF 61 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 118 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 162 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 162 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 121 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 119 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 128 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 105 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 117 bp overlap
ChIP GM12878 ENCFF485TGR 162 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 112 bp overlap
ChIP GM12878 ENCSR000AKB.CTCF.GM12878 162 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 162 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 162 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 162 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 162 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 142 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 162 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 162 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 162 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 162 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 162 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 162 bp overlap
ChIP HL-60 ENCFF833OFP 162 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 162 bp overlap
ChIP HL-60 ENCSR000DUP.CTCF.HL-60 162 bp overlap
ChIP MCF-7 ENCFF139NQI 162 bp overlap
ChIP MCF-7 ENCFF198DQX 162 bp overlap
ChIP MCF-7 ENCFF210JUZ 162 bp overlap
ChIP MCF-7 ENCFF494VXA 162 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 162 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 162 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 139 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 153 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 110 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 142 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 162 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 162 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 148 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 162 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 162 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 162 bp overlap
ChIP adrenal gland ENCFF596QXB 162 bp overlap
ChIP adrenal-gland ENCSR899JSO.CTCF.adrenal-gland 133 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 162 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 135 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 162 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 162 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 146 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 138 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 139 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 162 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 162 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 162 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 138 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 130 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 136 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 135 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 162 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 113 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 162 bp overlap
ChIP testis ENCSR981CID.CTCF.testis 148 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 162 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 162 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 162 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 162 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 162 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 162 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 143 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 162 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 147 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 162 bp overlap
FOS 1 dataset
ChIP CD4 GSE116695.FOS.CD4 162 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 68 bp overlap
HDAC2 1 dataset
ChIP K562 ENCFF744ALD 92 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 129 bp overlap
HMBOX1 2 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 162 bp overlap
ChIP K562 ENCFF317JJX 162 bp overlap
INO80 2 datasets
ChIP Hep-G2 GSE97411.INO80.Hep-G2 162 bp overlap
ChIP Huh-7 GSE97411.INO80.Huh-7 162 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 162 bp overlap
JUN 2 datasets
ChIP Karpas-299 GSE151413.JUN.Karpas-299 162 bp overlap
ChIP T-cell GSE136853.JUN.T-cell 162 bp overlap
JUNB 1 dataset
ChIP CD4 GSE116695.JUNB.CD4 91 bp overlap
MCRS1 2 datasets
ChIP Hep-G2 GSE107730.MCRS1.Hep-G2 134 bp overlap
ChIP Hep-G2 GSE97411.MCRS1.Hep-G2 134 bp overlap
MIER1 1 dataset
ChIP K-562 ENCSR426MDV.MIER1.K-562 76 bp overlap
MLLT1 2 datasets
ChIP K-562 ENCSR675LRO.MLLT1.K-562 70 bp overlap
ChIP K562 ENCFF871DSA 50 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 159 bp overlap
NFATC2 2 datasets
ChIP CD4_CD28-ab GSE116695.NFATC2.CD4_CD28-ab 162 bp overlap
ChIP CD4_fly-DNA GSE116695.NFATC2.CD4_fly-DNA 162 bp overlap
NKRF 1 dataset
ChIP K562 ENCFF815TQL 91 bp overlap
PKNOX1 1 dataset
ChIP K562 ENCFF236IUS 162 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 162 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 152 bp overlap
RAD21 1 dataset
ChIP MCF-7 ERP000209.RAD21.MCF-7 117 bp overlap
SMARCA4 2 datasets
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 162 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 162 bp overlap
SMARCB1 1 dataset
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 118 bp overlap
SMARCC1 1 dataset
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 162 bp overlap
STAG1 1 dataset
ChIP MCF-7 ERP000209.STAG1.MCF-7 141 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 135 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 136 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 162 bp overlap
ZNF24 8 datasets
ChIP K-562 ENCSR695EQB.ZNF24.K-562 162 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 162 bp overlap
ChIP K-562 ENCSR117WTM.ZNF24.K-562 152 bp overlap
ChIP K562 ENCFF497GLV 162 bp overlap
ChIP K562 ENCFF615YYW 162 bp overlap
ChIP K562 ENCFF877JCX 162 bp overlap
ChIP MCF-7 ENCFF861XIL 162 bp overlap
ChIP MCF-7 ENCSR503VTG.ZNF24.MCF-7 162 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 131 bp overlap
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