chr4 : 154,755,740 – 154,756,661

921 bp 63 TFs 0 linked genes

This 921 bp open chromatin element has no linked target genes and is bound by 63 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

63 transcription factors

BCL6B 1 dataset

Motif DE_60h DE_60h-BCL6B_MA0731.1 17 bp overlap

Dmrt1 1 dataset

Motif DE_60h DE_60h-Dmrt1_MA1603.2 9 bp overlap

EOMES 3 datasets

Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 136 bp overlap

ChIP hESC GSE26097.EOMES.hESC 144 bp overlap

ERF::SREBF2 2 datasets

Motif DE_48h DE_48h-ERFSREBF2_MA1939.2 16 bp overlap

Motif DE_60h DE_60h-ERFSREBF2_MA1939.2 16 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap

FOS::JUN 1 dataset

Motif DE_60h DE_60h-FOSJUN_MA1126.2 10 bp overlap

FOXA2 3 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 243 bp overlap

ChIP DE DE-FOXA2-1 384 bp overlap

ChIP DE DE-FOXA2-2 351 bp overlap

FOXO1::ELF1 2 datasets

Motif DE_48h DE_48h-FOXO1ELF1_MA1953.2 13 bp overlap

Motif DE_60h DE_60h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXP2 1 dataset

Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap

GATA1 2 datasets

Motif DE_48h DE_48h-GATA1_MA0035.5 7 bp overlap

Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap

GATA2 2 datasets

Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 921 bp overlap

ChIP DE DE-GATA4-2 920 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP YCC-3 GSE51705.GATA4.YCC-3 254 bp overlap

GATA5 2 datasets

Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 13 datasets

ChIP AGS GSE51705.GATA6.AGS 166 bp overlap

ChIP DE DE-GATA6-1 921 bp overlap

ChIP DE DE-GATA6-2 921 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 547 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 278 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 921 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 554 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 633 bp overlap

ChIP YCC-3 GSE51705.GATA6.YCC-3 239 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 921 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 241 bp overlap

Gata3 2 datasets

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

IKZF2 1 dataset

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

Irf1 2 datasets

Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap

Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap

JUN 1 dataset

Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap

JUND 3 datasets

Motif DE_48h DE_48h-JUND_MA0492.2 11 bp overlap

Motif DE_60h DE_60h-JUND_MA0492.2 11 bp overlap

LHX6 2 datasets

Motif DE_48h DE_48h-LHX6_MA0658.2 8 bp overlap

Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap

MEF2C 1 dataset

Motif DE_60h DE_60h-MEF2C_MA0497.2 11 bp overlap

MGA 1 dataset

Motif DE_60h DE_60h-MGA_MA0801.1 8 bp overlap

NFATC3 1 dataset

Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap

Nfat5 1 dataset

Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap

Nfatc1 1 dataset

Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap

PAX3 2 datasets

Motif DE_48h DE_48h-PAX3_MA1546.2 14 bp overlap

Motif DE_60h DE_60h-PAX3_MA1546.2 14 bp overlap

PRDM9 1 dataset

Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap

Rarg 1 dataset

Motif DE_60h DE_60h-Rarg_MA0859.2 15 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 338 bp overlap

SMAD2_3 3 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 305 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 549 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 262 bp overlap

SOX15 2 datasets

Motif DE_48h DE_48h-SOX15_MA1152.2 7 bp overlap

Motif DE_60h DE_60h-SOX15_MA1152.2 7 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 316 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 305 bp overlap

SOX8 1 dataset

Motif DE_60h DE_60h-SOX8_MA0868.3 7 bp overlap

Sox5 1 dataset

Motif DE_60h DE_60h-Sox5_MA0087.3 8 bp overlap

Sox6 2 datasets

Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap

Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap

Sox7 2 datasets

Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap

Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap

Stat2 2 datasets

Motif DE_48h DE_48h-Stat2_MA1623.2 10 bp overlap

Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap

TBR1 1 dataset

Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap

TBX1 1 dataset

Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap

TBX15 1 dataset

Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap

TBX18 1 dataset

Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap

TBX2 1 dataset

Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap

TBX20 1 dataset

Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap

TBX21 1 dataset

Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap

TBX5 1 dataset

Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap

TRPS1 2 datasets

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

Tbx6 1 dataset

Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap

VENTX 2 datasets

Motif DE_48h DE_48h-VENTX_MA0724.1 9 bp overlap

Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap

ZBTB1 2 datasets

ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 188 bp overlap

ChIP Jurkat_ZBTB1-KO_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_cDNA 170 bp overlap

ZFP14 1 dataset

Motif DE_60h DE_60h-ZFP14_MA1972.1 15 bp overlap

ZNF143 1 dataset

Motif DE_60h DE_60h-ZNF143_MA0088.2 16 bp overlap

ZNF16 1 dataset

Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap

ZNF331 1 dataset

Motif DE_60h DE_60h-ZNF331_MA1726.2 10 bp overlap

ZNF341 3 datasets

Motif DE_48h DE_48h-ZNF341_MA1655.2 8 bp overlap

Motif DE_60h DE_60h-ZNF341_MA1655.2 8 bp overlap

ZNF667 1 dataset

Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap

ZNF677 2 datasets

Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap

Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap

ZSCAN31 1 dataset

Motif DE_60h DE_60h-ZSCAN31_MA1722.2 18 bp overlap

Zfp335 2 datasets

Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap

Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap

Zic1::Zic2 1 dataset

Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap