chr1 : 80,258,770 80,258,972
202 bp 25 TFs 0 linked genes
This 202 bp open chromatin element has no linked target genes and is bound by 25 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:80,253,770 – 80,263,972
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 202 bp overlap
BMI1 2 datasets
ChIP GM12878 ENCSR469WII.BMI1.GM12878 200 bp overlap
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 202 bp overlap
BRD4 1 dataset
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 202 bp overlap
COMMD3-BMI1,BMI1 2 datasets
ChIP GM12878 ENCFF249AMT 202 bp overlap
ChIP MCF-7 ENCFF570JPP 131 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 202 bp overlap
ChIP neural cell ENCFF442QNK 157 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 202 bp overlap
GATA2 6 datasets
ChIP SH-SY5Y ENCFF485YIB 113 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 145 bp overlap
ChIP SK-N-SH ENCFF764OZD 64 bp overlap
ChIP SK-N-SH ENCFF764OZD 202 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 121 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 137 bp overlap
GATA3 1 dataset
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 202 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 202 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 202 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 202 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 187 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 202 bp overlap
ChIP SK-N-SH ENCFF285GEQ 202 bp overlap
MAML3 1 dataset
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 169 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 123 bp overlap
MXI1 1 dataset
ChIP neural cell ENCFF623HQN 202 bp overlap
MYCN 3 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 119 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 129 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 81 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 164 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 169 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 202 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 177 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 202 bp overlap
RFX1 8 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 202 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 202 bp overlap
ChIP K562 ENCFF421AVO 202 bp overlap
ChIP K562 ENCFF809XVG 202 bp overlap
ChIP MCF-7 ENCFF782EZS 202 bp overlap
ChIP MCF-7 ENCFF973QAD 202 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 202 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 202 bp overlap
SMC3 2 datasets
ChIP neural ENCSR404BPV.SMC3.neural 67 bp overlap
ChIP neural cell ENCFF795YGY 194 bp overlap
TP73_TA 1 dataset
ChIP SaOS-2 GSE15780.TP73_TA.SaOS-2 202 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 72 bp overlap