chr1 : 78,483,705 78,484,382
677 bp 25 TFs 1 linked gene
This 677 bp open chromatin element is linked to PTGFR and is bound by 25 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PTGFR 6.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:78,478,705 – 78,489,382
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
AFF4 2 datasets
ChIP WTC11 ENCFF556XTF 262 bp overlap
ChIP WTC11 ENCFF556XTF 445 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 120 bp overlap
BRD4 4 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 134 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 138 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 544 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 213 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 183 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 283 bp overlap
CTCF 5 datasets
ChIP SUM159 GSE46055.CTCF.SUM159 89 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 267 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 248 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 355 bp overlap
FLI1 1 dataset
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 214 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 285 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 436 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 199 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 214 bp overlap
MYOD1 1 dataset
ChIP myoblast GSE50413.MYOD1.myoblast 146 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 207 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 155 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 404 bp overlap
RNF2 1 dataset
ChIP HMELBRAF_OVER GSE51929.RNF2.HMELBRAF_OVER 174 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 257 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 248 bp overlap
SUZ12 1 dataset
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 160 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 287 bp overlap
TEAD4 2 datasets
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 169 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 428 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 299 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 176 bp overlap
ZNF281 1 dataset
ChIP WTC11 ENCFF551GAV 377 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 146 bp overlap