chr4 : 92,521,615 – 92,522,756
1,141 bp 57 TFs 1 linked gene
This 1.1 kb open chromatin element is linked to GRID2 and is bound by 57 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GRID2 218.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:92,516,615 – 92,527,756
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 290 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 156 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 652 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 132 bp overlap
Crx 4 datasets
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCFF681AJV 597 bp overlap
DPRX 4 datasets
Motif DE_36h DE_36h-DPRX_MA1480.2 9 bp overlap
Motif DE_48h DE_48h-DPRX_MA1480.2 9 bp overlap
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
E2F7 4 datasets
Motif DE_36h DE_36h-E2F7_MA0758.1 14 bp overlap
Motif DE_48h DE_48h-E2F7_MA0758.1 14 bp overlap
Motif DE_60h DE_60h-E2F7_MA0758.1 14 bp overlap
Motif DE_72h DE_72h-E2F7_MA0758.1 14 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 742 bp overlap
ChIP hESC GSE26097.EOMES.hESC 136 bp overlap
ESR1 2 datasets
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 231 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 178 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 439 bp overlap
ETV6 1 dataset
ChIP GM12878 GSE97661.ETV6.GM12878 246 bp overlap
FOXA1 8 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 312 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 209 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 108 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 177 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 162 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 175 bp overlap
ChIP breast-cancer_ICI GSE101407.FOXA1.breast-cancer_ICI 337 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 443 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 199 bp overlap
ChIP DE DE-FOXA2-1 1141 bp overlap
ChIP DE DE-FOXA2-2 1141 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 409 bp overlap
FOXH1 4 datasets
Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap
Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
Motif DE_72h DE_72h-FOXH1_MA0479.2 8 bp overlap
GATA2 1 dataset
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 277 bp overlap
GATA4 21 datasets
ChIP DE DE-GATA4-1 1141 bp overlap
ChIP DE DE-GATA4-2 1141 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP G296S GSE85628.GATA4.G296S 719 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 719 bp overlap
ChIP G296S_4 GSE85628.GATA4.G296S_4 291 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 776 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 287 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 245 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 274 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 134 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 312 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 534 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 206 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 288 bp overlap
ChIP foregut GSE117136.GATA4.foregut 556 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 1141 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 1140 bp overlap
GATA6 18 datasets
ChIP DE DE-GATA6-1 1141 bp overlap
ChIP DE DE-GATA6-2 1141 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 1141 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 1141 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 1073 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 1141 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 1141 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 1141 bp overlap
ChIP foregut GSE117136.GATA6.foregut 202 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 1141 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 304 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 268 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 133 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 602 bp overlap
GSC 4 datasets
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 4 datasets
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
Gata3 4 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 196 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 181 bp overlap
ChIP GM12878 ENCFF824TGK 614 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 147 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 251 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 258 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 198 bp overlap
KLF17 4 datasets
Motif DE_36h DE_36h-KLF17_MA1514.2 14 bp overlap
Motif DE_48h DE_48h-KLF17_MA1514.2 14 bp overlap
Motif DE_60h DE_60h-KLF17_MA1514.2 14 bp overlap
Motif DE_72h DE_72h-KLF17_MA1514.2 14 bp overlap
MED1 7 datasets
ChIP G296S GSE85628.MED1.G296S 277 bp overlap
ChIP G296S GSE85628.MED1.G296S 762 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 277 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 762 bp overlap
ChIP cardiomyocyte GSE85628.MED1.cardiomyocyte 370 bp overlap
ChIP cardiomyocyte_1 GSE85628.MED1.cardiomyocyte_1 371 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 371 bp overlap
MEIS1 2 datasets
Motif DE_36h DE_36h-MEIS1_MA1639.2 9 bp overlap
Motif DE_60h DE_60h-MEIS1_MA1639.2 9 bp overlap
MEIS2 2 datasets
Motif DE_36h DE_36h-MEIS2_MA1640.2 9 bp overlap
Motif DE_60h DE_60h-MEIS2_MA1640.2 9 bp overlap
Mecom 4 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 234 bp overlap
NFIL3 4 datasets
Motif DE_36h DE_36h-NFIL3_MA0025.3 9 bp overlap
Motif DE_48h DE_48h-NFIL3_MA0025.3 9 bp overlap
Motif DE_60h DE_60h-NFIL3_MA0025.3 9 bp overlap
Motif DE_72h DE_72h-NFIL3_MA0025.3 9 bp overlap
Nr1h3::Rxra 4 datasets
Motif DE_36h DE_36h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif DE_48h DE_48h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif DE_60h DE_60h-Nr1h3Rxra_MA0494.2 16 bp overlap
Motif DE_72h DE_72h-Nr1h3Rxra_MA0494.2 16 bp overlap
OTX1 4 datasets
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PBX2 2 datasets
Motif DE_36h DE_36h-PBX2_MA1113.3 9 bp overlap
Motif DE_60h DE_60h-PBX2_MA1113.3 9 bp overlap
PDX1 3 datasets
ChIP hESC GSE58685.PDX1.hESC 196 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 353 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 620 bp overlap
PHOX2A 4 datasets
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PITX1 4 datasets
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 4 datasets
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
PROP1 4 datasets
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap
Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap
Motif DE_72h DE_72h-PROP1_MA0715.1 11 bp overlap
Pax7 4 datasets
Motif DE_36h DE_36h-Pax7_MA0680.3 10 bp overlap
Motif DE_48h DE_48h-Pax7_MA0680.3 10 bp overlap
Motif DE_60h DE_60h-Pax7_MA0680.3 10 bp overlap
Motif DE_72h DE_72h-Pax7_MA0680.3 10 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 251 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 119 bp overlap
RFX1 2 datasets
ChIP MCF-7 ENCFF782EZS 441 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 288 bp overlap
RHOXF1 4 datasets
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 1002 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 642 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 252 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 754 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 712 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 261 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 724 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 200 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 265 bp overlap
TRPS1 4 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZKSCAN1 4 datasets
Motif DE_36h DE_36h-ZKSCAN1_MA1585.2 9 bp overlap
Motif DE_48h DE_48h-ZKSCAN1_MA1585.2 9 bp overlap
Motif DE_60h DE_60h-ZKSCAN1_MA1585.2 9 bp overlap
Motif DE_72h DE_72h-ZKSCAN1_MA1585.2 9 bp overlap
ZNF211 2 datasets
Motif DE_36h DE_36h-ZNF211_MA1974.2 10 bp overlap
Motif DE_60h DE_60h-ZNF211_MA1974.2 10 bp overlap
ZNF354C 4 datasets
Motif DE_36h DE_36h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_48h DE_48h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_60h DE_60h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_72h DE_72h-ZNF354C_MA0130.1 6 bp overlap
ZSCAN21 4 datasets
Motif DE_36h DE_36h-ZSCAN21_MA2336.1 7 bp overlap
Motif DE_48h DE_48h-ZSCAN21_MA2336.1 7 bp overlap
Motif DE_60h DE_60h-ZSCAN21_MA2336.1 7 bp overlap
Motif DE_72h DE_72h-ZSCAN21_MA2336.1 7 bp overlap
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