chr4 : 83,325,383 – 83,325,921
538 bp 41 TFs 1 linked gene
This 538 bp open chromatin element is linked to HPSE and is bound by 41 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
HPSE 8.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:83,320,383 – 83,330,921
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
AR 13 datasets
ChIP LNCaP GSE110655.AR.LNCaP 212 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 145 bp overlap
ChIP LNCaP-abl_DMSO GSE80238.AR.LNCaP-abl_DMSO 192 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 211 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 318 bp overlap
ChIP LNCaP_SHGATA2_ETOH GSE69043.AR.LNCaP_SHGATA2_ETOH 155 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 176 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 199 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 188 bp overlap
ChIP VCaP GSE148358.AR.VCaP 172 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 134 bp overlap
ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 81 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 203 bp overlap
Arid3a 1 dataset
Motif DE_72h DE_72h-Arid3a_MA0151.1 6 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 171 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 166 bp overlap
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
ESR1 3 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 226 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 226 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.ESR1.MCF-7_Tamoxifen 203 bp overlap
FEZF2 1 dataset
Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap
FIGLA 1 dataset
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA1 31 datasets
ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 290 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 421 bp overlap
ChIP LNCaP GSE52725.FOXA1.LNCaP 218 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 198 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 226 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 158 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 260 bp overlap
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 488 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 235 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 306 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 278 bp overlap
ChIP LNCaP_GSK GSE148926.FOXA1.LNCaP_GSK 246 bp overlap
ChIP LNCaP_GSK-48H GSE114266.FOXA1.LNCaP_GSK-48H 213 bp overlap
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 246 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 261 bp overlap
ChIP LNCaP_UPF1069 GSE114274.FOXA1.LNCaP_UPF1069 209 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 248 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 129 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 173 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 153 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 339 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 320 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 296 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 156 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 398 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 201 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 182 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 222 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 162 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 156 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 197 bp overlap
FOXA2 5 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 197 bp overlap
ChIP DE DE-FOXA2-1 525 bp overlap
ChIP DE DE-FOXA2-2 475 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 217 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 413 bp overlap
FOXD2 1 dataset
Motif DE_72h DE_72h-FOXD2_MA0847.4 11 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap
GATA2 4 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 305 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 305 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 204 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 191 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 132 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 535 bp overlap
ChIP DE DE-GATA4-2 538 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 538 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 538 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 530 bp overlap
ChIP DE DE-GATA6-2 538 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 483 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 536 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
HOXB13 8 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 107 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 184 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 185 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 153 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 215 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 152 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 216 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 251 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 381 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 320 bp overlap
NFIA 1 dataset
Motif DE_72h DE_72h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_72h DE_72h-NFIX_MA0671.2 6 bp overlap
NKX3-1 1 dataset
ChIP LNCaP_ETOH GSE28264.NKX3-1.LNCaP_ETOH 163 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_72h DE_72h-OTX2_MA0712.3 7 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 73 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
SREBF1 1 dataset
Motif DE_72h DE_72h-SREBF1_MA0829.3 10 bp overlap
SREBF2 1 dataset
Motif DE_72h DE_72h-SREBF2_MA0828.3 10 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 148 bp overlap
THRB 1 dataset
Motif DE_72h DE_72h-THRB_MA1576.2 18 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 292 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 273 bp overlap
ZEB1 1 dataset
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZNF460 1 dataset
Motif DE_72h DE_72h-ZNF460_MA1596.1 16 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 145 bp overlap
ZNF75A 1 dataset
Motif DE_72h DE_72h-ZNF75A_MA2097.1 12 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 217 bp overlap
Zfp809 1 dataset
Motif DE_72h DE_72h-Zfp809_MA2125.1 9 bp overlap
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