chr4 : 71,632,441 71,633,022
581 bp 43 TFs 0 linked genes
This 581 bp open chromatin element has no linked target genes and is bound by 43 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:71,627,441 – 71,638,022
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
CEBPG 1 dataset
Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Dux 1 dataset
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 359 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 134 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 141 bp overlap
ChIP DE DE-FOXA2-1 508 bp overlap
ChIP DE DE-FOXA2-2 450 bp overlap
FOXB1 1 dataset
Motif DE_60h DE_60h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
Foxl2 1 dataset
Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 524 bp overlap
ChIP DE DE-GATA4-2 546 bp overlap
ChIP foregut GSE117136.GATA4.foregut 354 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 533 bp overlap
ChIP DE DE-GATA6-2 483 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 539 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 581 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 401 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 581 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 581 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 559 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 547 bp overlap
ChIP foregut GSE117136.GATA6.foregut 223 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
MEF2B 1 dataset
Motif DE_60h DE_60h-MEF2B_MA0660.1 12 bp overlap
MEF2C 1 dataset
Motif DE_60h DE_60h-MEF2C_MA0497.2 11 bp overlap
MEF2D 1 dataset
Motif DE_60h DE_60h-MEF2D_MA0773.1 12 bp overlap
Mecom 1 dataset
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 208 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 250 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 186 bp overlap
ChIP hESC GSE18292.NANOG.hESC 101 bp overlap
NFIL3 1 dataset
Motif DE_60h DE_60h-NFIL3_MA0025.3 9 bp overlap
Nfatc2 1 dataset
Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap
POU4F1 1 dataset
Motif DE_60h DE_60h-POU4F1_MA0790.2 12 bp overlap
POU4F3 1 dataset
Motif DE_60h DE_60h-POU4F3_MA0791.2 12 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
SIX1 1 dataset
Motif DE_60h DE_60h-SIX1_MA1118.2 9 bp overlap
SIX2 1 dataset
Motif DE_60h DE_60h-SIX2_MA1119.2 11 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 335 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 337 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 259 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 273 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 254 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 154 bp overlap
Six4 1 dataset
Motif DE_60h DE_60h-Six4_MA2001.2 7 bp overlap
Stat4 1 dataset
Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 119 bp overlap
TBP 1 dataset
Motif DE_60h DE_60h-TBP_MA0108.3 7 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZFP14 1 dataset
Motif DE_60h DE_60h-ZFP14_MA1972.1 15 bp overlap
ZNF282 1 dataset
Motif DE_60h DE_60h-ZNF282_MA1154.2 15 bp overlap
ZNF382 1 dataset
Motif DE_60h DE_60h-ZNF382_MA1594.1 24 bp overlap
ZNF410 1 dataset
Motif DE_60h DE_60h-ZNF410_MA0752.2 16 bp overlap
ZNF558 1 dataset
Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap