chr3 : 180,871,835 180,872,041
206 bp 43 TFs 1 linked gene
This 206 bp open chromatin element is linked to ENSG00000285336 and is bound by 43 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000285336 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:180,866,835 – 180,877,041
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 206 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 206 bp overlap
BRD2 4 datasets
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 76 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 206 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 115 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 206 bp overlap
BRD4 6 datasets
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 135 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 206 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 198 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 205 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 63 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 187 bp overlap
CASZ1 2 datasets
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 152 bp overlap
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 188 bp overlap
CRY2 1 dataset
ChIP U2OS GSE130602.CRY2.U2OS 83 bp overlap
DPF2 3 datasets
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 206 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 188 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 202 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 205 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 206 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 206 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 108 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 169 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 128 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 128 bp overlap
KDM1A 1 dataset
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 201 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 95 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE83671.KMT2A.THP-1 195 bp overlap
KMT2C 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 135 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4-T910M 56 bp overlap
KMT2D 3 datasets
ChIP BIN-67_ctrl GSE117734.KMT2D.BIN-67_ctrl 68 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 160 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4-T910M 186 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 111 bp overlap
ChIP K562 ENCFF455EEO 175 bp overlap
MAX 1 dataset
ChIP K562 ENCFF524IJO 206 bp overlap
MTA1 1 dataset
ChIP K-562 ENCSR807BGP.MTA1.K-562 86 bp overlap
MYOD1 5 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 206 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 206 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 206 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 198 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 110 bp overlap
MYOG 3 datasets
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 181 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 148 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 107 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 64 bp overlap
NFE2 3 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 137 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 86 bp overlap
ChIP K562 ENCFF047YKA 53 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 55 bp overlap
NR3C1 3 datasets
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 60 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 200 bp overlap
ChIP U2OS_siHic5siNS GSE109383.NR3C1.U2OS_siHic5siNS 165 bp overlap
POLR2A 1 dataset
ChIP gastroesophageal sphincter ENCFF070PCA 206 bp overlap
RUVBL2 2 datasets
ChIP U2OS GSE130602.RUVBL2.U2OS 51 bp overlap
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 87 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 206 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 206 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 59 bp overlap
SMARCC1 3 datasets
ChIP BIN-67 GSE117734.SMARCC1.BIN-67 50 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 146 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 167 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 161 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 192 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 142 bp overlap
SS18 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 90 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 154 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 206 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 84 bp overlap
TP53 1 dataset
ChIP SaOS-2 GSE15780.TP53.SaOS-2 174 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR099NCH.ZNF24.K-562 105 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 156 bp overlap