chr1 : 68,103,068 68,103,493
425 bp 24 TFs 0 linked genes
This 425 bp open chromatin element has no linked target genes and is bound by 24 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:68,098,068 – 68,108,493
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 146 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 94 bp overlap
BRD4 6 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 239 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 425 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 317 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 286 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 312 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 347 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 180 bp overlap
CTCF 5 datasets
ChIP HAP1 GSE152721.CTCF.HAP1 207 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 64 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 201 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 165 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 143 bp overlap
EP300 3 datasets
ChIP Ishikawa ENCFF364ZWT 330 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 425 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 205 bp overlap
ESR1 6 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 192 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 351 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 329 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 395 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 82 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 369 bp overlap
EZH2 2 datasets
ChIP Karpas-422_CPI360-D4 GSE134136.EZH2.Karpas-422_CPI360-D4 277 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.EZH2.Karpas-422_CPI360-D8 148 bp overlap
FOXM1 2 datasets
ChIP Ishikawa ENCFF578VDD 409 bp overlap
ChIP Ishikawa ENCSR000BUS.FOXM1.Ishikawa 425 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 337 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 370 bp overlap
JUN 2 datasets
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 187 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 228 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 173 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 425 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 366 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 271 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 52 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 182 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 410 bp overlap
RELA 7 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 220 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 222 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 185 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 196 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 172 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 138 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 197 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 129 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 354 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 413 bp overlap
SUZ12 2 datasets
ChIP Karpas-422_CPI360-D4 GSE134136.SUZ12.Karpas-422_CPI360-D4 211 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 425 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 404 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 83 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 271 bp overlap