chr3 : 149,825,387 149,825,694
307 bp 48 TFs 0 linked genes
This 307 bp open chromatin element has no linked target genes and is bound by 48 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:149,820,387 – 149,830,694
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 247 bp overlap
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 169 bp overlap
ARID1A 2 datasets
ChIP RMG-I GSE120058.ARID1A.RMG-I 209 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 259 bp overlap
ASCL1 1 dataset
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 143 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 204 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 252 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 298 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 108 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 164 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 96 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 285 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 197 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 300 bp overlap
Hand1 1 dataset
Motif ES_0h ES_0h-Hand1_MA2123.1 9 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 183 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 168 bp overlap
NANOG 4 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 268 bp overlap
ChIP LNCaP_pNanog1_Dox GSE74799.NANOG.LNCaP_pNanog1_Dox 177 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 197 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 153 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 80 bp overlap
POLR2A 2 datasets
ChIP MCF-7 ENCFF309IKZ 307 bp overlap
ChIP spleen ENCFF706IUS 307 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 237 bp overlap
Ptf1A 1 dataset
Motif ES_0h ES_0h-Ptf1A_MA1620.2 8 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 149 bp overlap
SMAD2 1 dataset
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SNAI1 1 dataset
Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap
SNAI3 1 dataset
Motif ES_0h ES_0h-SNAI3_MA1559.2 9 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 90 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 154 bp overlap
TBX5 1 dataset
Motif ES_0h ES_0h-TBX5_MA0807.1 8 bp overlap
TCF12 3 datasets
Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 244 bp overlap
TCF3 1 dataset
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif ES_0h ES_0h-TCF4_MA0830.3 8 bp overlap
TEAD1 2 datasets
ChIP WTC11 ENCFF502QUV 307 bp overlap
ChIP WTC11 ENCFF502QUV 203 bp overlap
TEAD4 3 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 280 bp overlap
ChIP H1 ENCFF778PAX 240 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 280 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 282 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 258 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 86 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 145 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZFX 1 dataset
ChIP MCF-7 GSE102616.ZFX.MCF-7 124 bp overlap
ZNF121 1 dataset
ChIP HepG2 ENCFF343YSL 55 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 159 bp overlap
ZSCAN4 1 dataset
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap
Zic2 1 dataset
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap