Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

36 transcription factors

BRD4 3 datasets

ChIP BE2C GSE80151.BRD4.BE2C 198 bp overlap

ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 198 bp overlap

ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 198 bp overlap

CHD2 2 datasets

ChIP SK-N-SH ENCFF669KMB 83 bp overlap

ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 129 bp overlap

CTCF 11 datasets

ChIP A-673 ENCSR611JJS.CTCF.A-673 198 bp overlap

ChIP BE2C ENCFF757SRF 198 bp overlap

ChIP BE2C ENCSR000DQD.CTCF.BE2C 169 bp overlap

ChIP HAP1 GSE152721.CTCF.HAP1 198 bp overlap

ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 118 bp overlap

ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 196 bp overlap

ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 181 bp overlap

ChIP K-562_15173 GSE131349.CTCF.K-562_15173 92 bp overlap

ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 193 bp overlap

ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 114 bp overlap

ChIP neural progenitor cell ENCFF581WPG 124 bp overlap

EBF3_P177L 1 dataset

ChIP SK-N-SH GSE90682.EBF3_P177L.SK-N-SH 77 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 134 bp overlap

EP300 2 datasets

ChIP SK-N-SH ENCFF829RWA 84 bp overlap

ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 198 bp overlap

ESR1 1 dataset

ChIP MCF-7_ethanol_MKL1D200 GSE107476.ESR1.MCF-7_ethanol_MKL1D200 66 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 198 bp overlap

ChIP DE DE-FOXA2-2 198 bp overlap

FOXJ3 1 dataset

ChIP SK-N-SH ENCFF124KVL 121 bp overlap

GATA2 2 datasets

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 165 bp overlap

ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 156 bp overlap

GATA3 2 datasets

ChIP SH-SY5Y ENCFF475HYF 198 bp overlap

ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 198 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 198 bp overlap

ChIP DE DE-GATA4-2 198 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 198 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 198 bp overlap

ChIP DE DE-GATA6-2 198 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 198 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 198 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 198 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 198 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 198 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 198 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 188 bp overlap

HAND2 1 dataset

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 198 bp overlap

ISL1 1 dataset

ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 198 bp overlap

KDM1A 1 dataset

ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 169 bp overlap

MAML3 1 dataset

ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 50 bp overlap

MRTFB 1 dataset

ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 198 bp overlap

NEUROD1 2 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 144 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 198 bp overlap

NFIC 1 dataset

ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 75 bp overlap

PHOX2B 1 dataset

ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 198 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 198 bp overlap

POLR2A 1 dataset

ChIP SK-N-MC ENCFF088IVG 130 bp overlap

RAD21 2 datasets

ChIP SK-N-SH ENCFF747MAS 173 bp overlap

ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 178 bp overlap

RCOR1 1 dataset

ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 194 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 198 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 198 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 198 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 198 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 198 bp overlap

SMARCA4 1 dataset

ChIP NGP GSE134626.SMARCA4.NGP 84 bp overlap

SMARCC1 1 dataset

ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 103 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 198 bp overlap

SS18 1 dataset

ChIP Aska-SS GSE108025.SS18.Aska-SS 198 bp overlap

TBX2 1 dataset

ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 171 bp overlap

TCF4 1 dataset

ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 178 bp overlap

TEAD4 2 datasets

ChIP BE2C GSE84389.TEAD4.BE2C 114 bp overlap

ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 114 bp overlap

TWIST1 6 datasets

ChIP BE2C GSE80151.TWIST1.BE2C 198 bp overlap

ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 110 bp overlap

ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 62 bp overlap

ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 110 bp overlap

ChIP SHEP-21N_DOX_24H GSE80151.TWIST1.SHEP-21N_DOX_24H 89 bp overlap

ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 198 bp overlap

ZNF8 1 dataset

ChIP SK-N-SH ENCFF131SMT 80 bp overlap

Genome Browser