chr1 : 64,886,955 64,887,237
282 bp 36 TFs 0 linked genes
This 282 bp open chromatin element has no linked target genes and is bound by 36 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:64,881,955 – 64,892,237
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 109 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 161 bp overlap
BRD4 3 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 205 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 282 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 282 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 171 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 282 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 119 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 173 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 175 bp overlap
EZH2 2 datasets
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 74 bp overlap
ChIP neural progenitor cell ENCFF018MKA 282 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 282 bp overlap
ChIP DE DE-FOXA2-2 282 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 128 bp overlap
MAX 4 datasets
ChIP H1 ENCFF601FOM 282 bp overlap
ChIP H1 ENCFF914VQY 161 bp overlap
ChIP NCI-H128 GSE41105.MAX.NCI-H128 179 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 266 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 232 bp overlap
MYC 1 dataset
ChIP H1 ENCFF794ZJT 204 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 282 bp overlap
ONECUT1 4 datasets
ChIP H9 ERP004206.ONECUT1.H9 196 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 145 bp overlap
ChIP liver ERP002306.ONECUT1.liver 142 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 282 bp overlap
PKNOX1 1 dataset
ChIP HEK293T ENCFF174WDB 282 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
POU5F1 2 datasets
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 282 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 215 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 174 bp overlap
SMARCA4 4 datasets
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 215 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 282 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 269 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 176 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 257 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 247 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 255 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 244 bp overlap
SOX2 6 datasets
ChIP H9 GSE46837.SOX2.H9 200 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 282 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 259 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 282 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 282 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 282 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 282 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 188 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 265 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 229 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 232 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 198 bp overlap
ZIM3 2 datasets
ChIP HEK293 GSE76494.ZIM3.HEK293 241 bp overlap
ChIP HEK293T GSE78099.ZIM3.HEK293T 282 bp overlap
ZNF496 1 dataset
ChIP HEK293T GSE78099.ZNF496.HEK293T 163 bp overlap