chr3 : 137,770,248 137,770,686
438 bp 35 TFs 2 linked genes
This 438 bp open chromatin element is linked to LINC01210 and SOX14 and is bound by 35 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LINC01210 1.3 kb Proximal Proximity
SOX14 5.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:137,765,248 – 137,775,686
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 314 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 393 bp overlap
BRD4 2 datasets
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 434 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 438 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 241 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 420 bp overlap
CTCF 16 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 113 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 167 bp overlap
ChIP GM23338 ENCFF772DML 75 bp overlap
ChIP H9 ENCFF152GTF 216 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 193 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 90 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 117 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 69 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 113 bp overlap
ChIP endodermal cell ENCFF471YCZ 207 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 72 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 412 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 245 bp overlap
ChIP neural progenitor cell ENCFF420RBO 174 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 130 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 76 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF364PUR 231 bp overlap
ChIP BLaER1 ENCFF460KDD 310 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 215 bp overlap
EZH2 24 datasets
ChIP A673 ENCFF790MVL 438 bp overlap
ChIP A673 ENCFF955JRZ 438 bp overlap
ChIP GM23248 ENCFF404ZHM 186 bp overlap
ChIP GM23338 ENCFF613YON 438 bp overlap
ChIP GM23338 ENCFF886DXX 412 bp overlap
ChIP H1 ENCFF232NZA 438 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 339 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 284 bp overlap
ChIP SK-N-MC ENCFF434OHW 260 bp overlap
ChIP SK-N-MC ENCFF674XUJ 258 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 198 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 288 bp overlap
ChIP astrocyte ENCFF365JTP 438 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 438 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 438 bp overlap
ChIP fibroblast of lung ENCFF479BAW 370 bp overlap
ChIP fibroblast of lung ENCFF479BAW 72 bp overlap
ChIP hESC GSE113817.EZH2.hESC 292 bp overlap
ChIP hepatocyte ENCFF552DZB 438 bp overlap
ChIP keratinocyte ENCFF070STK 397 bp overlap
ChIP neural progenitor cell ENCFF018MKA 438 bp overlap
ChIP neural progenitor cell ENCFF472NFV 438 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 357 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 150 bp overlap
JUN 1 dataset
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 59 bp overlap
KDM4A 4 datasets
ChIP H1 ENCFF078LED 257 bp overlap
ChIP H1 ENCFF078LED 429 bp overlap
ChIP H1 ENCFF078LED 116 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 396 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 118 bp overlap
MYCN 1 dataset
ChIP NB-1643 GSE138295.MYCN.NB-1643 214 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 248 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 181 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 438 bp overlap
PHF8 1 dataset
ChIP H1 ENCFF427UFV 219 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 438 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 220 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 438 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 264 bp overlap
RING1 2 datasets
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 218 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 80 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 438 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 355 bp overlap
RUNX1 1 dataset
ChIP CD34_ADULT GSE70660.RUNX1.CD34_ADULT 203 bp overlap
SMARCA4 2 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 160 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 103 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 226 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 209 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 83 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 438 bp overlap
SUZ12 4 datasets
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 438 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 52 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 313 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 368 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 307 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 230 bp overlap
ZNF605 1 dataset
ChIP HEK293T GSE78099.ZNF605.HEK293T 73 bp overlap