chr3 : 120,983,421 120,984,252
831 bp 47 TFs 0 linked genes
This 831 bp open chromatin element has no linked target genes and is bound by 47 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:120,978,421 – 120,989,252
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 280 bp overlap
ARRB1 1 dataset
ChIP LNCaP-C4-2 GSE55615.ARRB1.LNCaP-C4-2 130 bp overlap
CEBPA 1 dataset
ChIP liver ERP002306.CEBPA.liver 245 bp overlap
CEBPD 1 dataset
ChIP Hep-G2 ENCSR000BQJ.CEBPD.Hep-G2 116 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 229 bp overlap
CTCF 1 dataset
ChIP U-937 ERP008568.CTCF.U-937 94 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 142 bp overlap
ChIP BLaER1 ENCFF335XTP 168 bp overlap
EOMES 2 datasets
Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 518 bp overlap
ERG 2 datasets
ChIP VCaP GSE49091.ERG.VCaP 127 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 155 bp overlap
ESR1 2 datasets
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 137 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 155 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 556 bp overlap
ChIP DE DE-FOXA2-2 539 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 477 bp overlap
ChIP DE DE-GATA4-2 636 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 450 bp overlap
ChIP DE DE-GATA6-2 725 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 603 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 613 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 638 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 331 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 668 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 734 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 250 bp overlap
HNF4A 2 datasets
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 80 bp overlap
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 189 bp overlap
IRF3 1 dataset
Motif DE_36h DE_36h-IRF3_MA1418.2 17 bp overlap
IRF4 1 dataset
Motif DE_36h DE_36h-IRF4_MA1419.2 14 bp overlap
IRF8 1 dataset
Motif DE_36h DE_36h-IRF8_MA0652.2 13 bp overlap
Irf1 1 dataset
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 294 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 300 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 573 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 248 bp overlap
MGA 1 dataset
Motif DE_36h DE_36h-MGA_MA0801.1 8 bp overlap
NANOG 1 dataset
ChIP GM23338 ENCFF065NZG 311 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 123 bp overlap
RAD51 1 dataset
ChIP U2OS_UASISIER ERP001996.RAD51.U2OS_UASISIER 66 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 109 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 766 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 668 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 383 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 454 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 320 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 532 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 349 bp overlap
SPDEF 1 dataset
ChIP A-549 GSE86957.SPDEF.A-549 439 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 541 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 191 bp overlap
TBR1 1 dataset
Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_36h DE_36h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
TEAD4 1 dataset
ChIP MKN28 GSE44416.TEAD4.MKN28 171 bp overlap
Tbx6 1 dataset
Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap
Zfp809 1 dataset
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap