chr2 : 204,203,664 – 204,204,017
353 bp 38 TFs 0 linked genes
This 353 bp open chromatin element has no linked target genes and is bound by 38 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:204,198,664 – 204,209,017
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
AR 13 datasets
ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 186 bp overlap
ChIP prostate GSE56288.AR.prostate 256 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.AR.prostate-cancer_PDX_136 94 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 235 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 79 bp overlap
ChIP prostate_1592_T GSE130408.AR.prostate_1592_T 149 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 247 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 267 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 353 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 250 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 91 bp overlap
ChIP prostate_P1_T GSE130408.AR.prostate_P1_T 162 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 241 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 264 bp overlap
CREB1 2 datasets
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 213 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 86 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 201 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 119 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 165 bp overlap
ERG 2 datasets
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 171 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 165 bp overlap
ESR1 4 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 84 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 245 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 212 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 207 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 353 bp overlap
FOXA1 17 datasets
ChIP LNCaP GSE56288.FOXA1.LNCaP 148 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 133 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 243 bp overlap
ChIP prostate_2030 GSE130408.FOXA1.prostate_2030 126 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 317 bp overlap
ChIP prostate_2078_T GSE130408.FOXA1.prostate_2078_T 126 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 281 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 181 bp overlap
ChIP prostate_P1 GSE130408.FOXA1.prostate_P1 124 bp overlap
ChIP prostate_P13_T GSE130408.FOXA1.prostate_P13_T 181 bp overlap
ChIP prostate_P19 GSE130408.FOXA1.prostate_P19 157 bp overlap
ChIP prostate_P1_T GSE130408.FOXA1.prostate_P1_T 176 bp overlap
ChIP prostate_P23 GSE130408.FOXA1.prostate_P23 177 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 213 bp overlap
ChIP prostate_P27 GSE130408.FOXA1.prostate_P27 154 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 175 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 172 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-1 305 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-2 238 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 287 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 325 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 265 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 353 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 353 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 327 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 283 bp overlap
GRHL2 4 datasets
ChIP HBE GSE46194.GRHL2.HBE 208 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 178 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 190 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 141 bp overlap
HOXB13 17 datasets
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 121 bp overlap
ChIP prostate_2078 GSE130408.HOXB13.prostate_2078 146 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 100 bp overlap
ChIP prostate_2480 GSE130408.HOXB13.prostate_2480 252 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 141 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 199 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 282 bp overlap
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 152 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 174 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 244 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 201 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 94 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 275 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 185 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 202 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 115 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 161 bp overlap
KLF1 1 dataset
Motif DE_36h DE_36h-KLF1_MA0493.3 8 bp overlap
KLF2 1 dataset
Motif DE_36h DE_36h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
Motif DE_36h DE_36h-KLF4_MA0039.5 8 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 211 bp overlap
KLF5 2 datasets
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
ChIP ESO-26 GSE132680.KLF5.ESO-26 353 bp overlap
KLF9 1 dataset
Motif DE_36h DE_36h-KLF9_MA1107.3 11 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap
NCOR2 1 dataset
ChIP LS180 GSE39277.NCOR2.LS180 128 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 186 bp overlap
PATZ1 1 dataset
Motif DE_36h DE_36h-PATZ1_MA1961.2 11 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 250 bp overlap
PKNOX1 2 datasets
ChIP MCF-7 ENCFF116OCS 210 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 165 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 187 bp overlap
REST 1 dataset
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 326 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 286 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 281 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 353 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 353 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 295 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 324 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 353 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 345 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 266 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 310 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 179 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 116 bp overlap
STAT1 1 dataset
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 147 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 221 bp overlap
ZKSCAN2 1 dataset
ChIP HEK293T GSE78099.ZKSCAN2.HEK293T 123 bp overlap
ZNF708 1 dataset
Motif DE_36h DE_36h-ZNF708_MA1730.2 9 bp overlap
ZSCAN4 1 dataset
Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap
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