chr2 : 140,964,239 – 140,964,649
410 bp 31 TFs 0 linked genes
This 410 bp open chromatin element has no linked target genes and is bound by 31 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:140,959,239 – 140,969,649
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
ATF2 2 datasets
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
Motif ES_0h ES_0h-ATF2_MA1632.2 10 bp overlap
CREB1 2 datasets
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif ES_0h ES_0h-CREB1_MA0018.5 8 bp overlap
CREB3L4 2 datasets
Motif DE_12h DE_12h-CREB3L4_MA1475.2 9 bp overlap
Motif ES_0h ES_0h-CREB3L4_MA1475.2 9 bp overlap
CREM 2 datasets
Motif DE_12h DE_12h-CREM_MA0609.3 10 bp overlap
Motif ES_0h ES_0h-CREM_MA0609.3 10 bp overlap
CTCF 101 datasets
ChIP 22Rv1 ENCFF466OXN 410 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 116 bp overlap
ChIP AG04449 ENCFF248MBD 181 bp overlap
ChIP AG04450 ENCFF116DJL 278 bp overlap
ChIP BJ ENCFF434HEC 298 bp overlap
ChIP C4-2B ENCFF821XVN 410 bp overlap
ChIP C4-2B ENCFF821XVN 410 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP GM06990 ENCFF471OQT 267 bp overlap
ChIP GM12864 ENCFF357DQE 237 bp overlap
ChIP GM12865 ENCFF067GFI 242 bp overlap
ChIP GM12872 ENCFF697BYI 261 bp overlap
ChIP GM12873 ENCFF711LOS 285 bp overlap
ChIP GM12874 ENCFF942MTD 220 bp overlap
ChIP GM12875 ENCFF081UCQ 221 bp overlap
ChIP GM13977 ENCFF528ESQ 164 bp overlap
ChIP H54 ENCFF255TVO 76 bp overlap
ChIP H9 ENCFF152GTF 279 bp overlap
ChIP HCT116 ENCFF003KHP 278 bp overlap
ChIP HCT116 ENCFF209YMI 237 bp overlap
ChIP HCT116 ENCFF373YMA 284 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 101 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 102 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 127 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 92 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 101 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 168 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 105 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF598YSU 192 bp overlap
ChIP LNCAP ENCFF223HIG 261 bp overlap
ChIP LNCAP ENCFF223HIG 130 bp overlap
ChIP LNCAP ENCFF700QXT 262 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP MCF 10A ENCFF988BGF 347 bp overlap
ChIP MCF-7 ENCFF139NQI 233 bp overlap
ChIP MCF-7 ENCFF162GNE 71 bp overlap
ChIP MCF-7 ENCFF198DQX 206 bp overlap
ChIP MCF-7 ENCFF210JUZ 339 bp overlap
ChIP MCF-7 ENCFF414SZG 64 bp overlap
ChIP MCF-7 ENCFF424NQR 80 bp overlap
ChIP MCF-7 ENCFF494VXA 206 bp overlap
ChIP MCF-7 ENCFF844STM 107 bp overlap
ChIP MCF-7 ENCFF954TUV 104 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 139 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 109 bp overlap
ChIP NCI-H929 ENCFF305JAB 227 bp overlap
ChIP PC-3 ENCFF487TUI 229 bp overlap
ChIP PC-3 ENCFF487TUI 84 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 247 bp overlap
ChIP RWPE2 ENCFF911IEE 398 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 410 bp overlap
ChIP VCaP ENCFF858YQT 382 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 144 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 139 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 107 bp overlap
ChIP WTC11 ENCFF658QVH 344 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 345 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 224 bp overlap
ChIP brain ENCFF163BBN 410 bp overlap
ChIP brain ENCFF685VRG 410 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 255 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 276 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 281 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 155 bp overlap
ChIP chondrocyte ENCFF134ORZ 375 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 261 bp overlap
ChIP endodermal cell ENCFF471YCZ 282 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 264 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 60 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 410 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 292 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 53 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 278 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 219 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 290 bp overlap
ChIP heart left ventricle ENCFF244ZHV 365 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 297 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 337 bp overlap
ChIP nephron ENCFF589HXU 364 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 342 bp overlap
ChIP neural crest cell ENCFF182LWK 246 bp overlap
ChIP neural progenitor cell ENCFF420RBO 251 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 105 bp overlap
ChIP osteocyte ENCFF929FPD 250 bp overlap
ChIP placenta ENCFF029PHY 172 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 246 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 245 bp overlap
ChIP right lobe of liver ENCFF011NDG 333 bp overlap
ChIP right lobe of liver ENCFF250KSY 300 bp overlap
ChIP smooth muscle cell ENCFF656FBT 180 bp overlap
ChIP transverse colon ENCFF594PFO 367 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 267 bp overlap
FOS 2 datasets
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
Motif ES_0h ES_0h-FOS_MA1951.2 13 bp overlap
FOSL2::JUN 2 datasets
Motif DE_12h DE_12h-FOSL2JUN_MA1131.2 10 bp overlap
Motif ES_0h ES_0h-FOSL2JUN_MA1131.2 10 bp overlap
FOSL2::JUND 2 datasets
Motif DE_12h DE_12h-FOSL2JUND_MA1145.2 10 bp overlap
Motif ES_0h ES_0h-FOSL2JUND_MA1145.2 10 bp overlap
JDP2 2 datasets
Motif DE_12h DE_12h-JDP2_MA0656.2 10 bp overlap
Motif ES_0h ES_0h-JDP2_MA0656.2 10 bp overlap
JUN 2 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
Motif ES_0h ES_0h-JUN_MA0488.2 10 bp overlap
JUN::JUNB 2 datasets
Motif DE_12h DE_12h-JUNJUNB_MA1133.2 11 bp overlap
Motif ES_0h ES_0h-JUNJUNB_MA1133.2 11 bp overlap
JUND 2 datasets
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
Motif ES_0h ES_0h-JUND_MA0492.2 11 bp overlap
MEIS1 3 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PLAG1 2 datasets
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
Motif ES_0h ES_0h-PLAG1_MA0163.1 14 bp overlap
Prdm15 1 dataset
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
RAD21 8 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP HCT116 ENCFF568PEO 266 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 225 bp overlap
ChIP K562 ENCFF066JWO 343 bp overlap
ChIP MCF-7 ENCFF694KOM 297 bp overlap
ChIP MCF-7 ENCFF724VCQ 248 bp overlap
ChIP liver ENCFF485PAC 341 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
SMAD2 2 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
STAG1 1 dataset
ChIP HepG2 ENCFF843EBZ 274 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
ZBTB33 1 dataset
ChIP MCF-7 ENCFF622BUU 296 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF530 3 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
ZNF669 1 dataset
Motif DE_12h DE_12h-ZNF669_MA1985.1 15 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
ZNF816 1 dataset
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
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