chr2 : 124,607,366 124,608,266
900 bp 41 TFs 0 linked genes
This 900 bp open chromatin element has no linked target genes and is bound by 41 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:124,602,366 – 124,613,266
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
CDX2 1 dataset
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 115 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 177 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF460KDD 240 bp overlap
ChIP BLaER1 ENCFF460KDD 108 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 245 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 257 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 173 bp overlap
ESR1 1 dataset
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 240 bp overlap
ESRRA 1 dataset
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 235 bp overlap
FOXA1 14 datasets
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 128 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 244 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 138 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 341 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 192 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 211 bp overlap
ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 325 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 391 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 429 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 442 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 311 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 305 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 297 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 337 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 197 bp overlap
ChIP DE DE-FOXA2-1 660 bp overlap
ChIP DE DE-FOXA2-2 758 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 297 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 171 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 388 bp overlap
ChIP DE DE-GATA4-1 749 bp overlap
ChIP DE DE-GATA4-2 900 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 205 bp overlap
ChIP foregut GSE117136.GATA4.foregut 854 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 512 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 455 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 464 bp overlap
ChIP DE DE-GATA6-2 644 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 400 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 571 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 192 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 277 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 440 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 270 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 219 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 288 bp overlap
ChIP foregut GSE117136.GATA6.foregut 780 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 395 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 272 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 379 bp overlap
HIF1A 1 dataset
ChIP U2OS_DMSO GSE85096.HIF1A.U2OS_DMSO 331 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 138 bp overlap
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 132 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 208 bp overlap
KMT2C 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 425 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 466 bp overlap
NBN 1 dataset
ChIP MCF-10A GSE93038.NBN.MCF-10A 397 bp overlap
NR2F2 1 dataset
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 237 bp overlap
NR3C1 2 datasets
ChIP HCC1937 GSE152203.NR3C1.HCC1937 478 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 206 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 217 bp overlap
POU5F1 2 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 134 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 253 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 296 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 694 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 252 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 349 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 168 bp overlap
SMARCA4 2 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 75 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 183 bp overlap
SMARCC1 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 275 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 180 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 198 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 405 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 302 bp overlap
ChIP HepG2 ENCFF767OCK 581 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 332 bp overlap
TCF12 1 dataset
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 229 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 362 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 371 bp overlap
TEAD4 2 datasets
ChIP Hep-G2 ENCSR000BRP.TEAD4.Hep-G2 174 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 310 bp overlap
TFAP4 2 datasets
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 175 bp overlap
ChIP HepG2 ENCFF932XOY 397 bp overlap
YAP1 1 dataset
ChIP MCF-10A GSE97972.YAP1.MCF-10A 218 bp overlap