chr2 : 65,133,694 65,133,912
218 bp 31 TFs 1 linked gene
This 218 bp open chromatin element is linked to RAB1A and is bound by 31 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RAB1A 3.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:65,128,694 – 65,138,912
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 218 bp overlap
ChIP K562 ENCFF938UXQ 218 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 218 bp overlap
ChIP K562 ENCFF963TXY 190 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 218 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 135 bp overlap
ChIP K562 ENCFF673OEZ 218 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 150 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 218 bp overlap
ChIP K562 ENCFF739JDE 218 bp overlap
ChIP K562 ENCFF775HUO 218 bp overlap
EP300 1 dataset
ChIP K562 ENCFF226VMS 218 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 165 bp overlap
GATA1 5 datasets
ChIP K-562 GSE107726.GATA1.K-562 201 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 118 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 160 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 179 bp overlap
ChIP K562 ENCFF094CMK 169 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000BKM.GATA2.K-562 129 bp overlap
ChIP K562 ENCFF544PCK 218 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 189 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 218 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 218 bp overlap
GATA6 9 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 133 bp overlap
ChIP DE DE-GATA6-1 206 bp overlap
ChIP DE DE-GATA6-2 218 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 169 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 218 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 208 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 218 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 218 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 164 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 218 bp overlap
KLF16 2 datasets
ChIP K-562 ENCSR760UVO.KLF16.K-562 126 bp overlap
ChIP K562 ENCFF464PIV 218 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 201 bp overlap
NCOR1 3 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 218 bp overlap
ChIP K562 ENCFF788MPU 218 bp overlap
ChIP K562 ENCFF866HRM 218 bp overlap
NR2F1 2 datasets
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 218 bp overlap
ChIP K562 ENCFF221HJH 213 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 173 bp overlap
ChIP K562 ENCFF004YPK 218 bp overlap
NR2F6 2 datasets
ChIP K-562 ENCSR707QWA.NR2F6.K-562 168 bp overlap
ChIP K562 ENCFF674RQA 218 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 185 bp overlap
ChIP K562 ENCFF740YLK 98 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 218 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 161 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 161 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 218 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 218 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 218 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 210 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 218 bp overlap
ChIP K562 ENCFF690CFF 218 bp overlap
TAL1 11 datasets
ChIP K-562 GSE107726.TAL1.K-562 218 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 218 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 190 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 188 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 190 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 201 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 201 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 177 bp overlap
ChIP K562 ENCFF620GMX 204 bp overlap
ChIP K562 ENCFF661CCK 214 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 105 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 210 bp overlap
ChIP K562 ENCFF931DJY 172 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 186 bp overlap
ChIP K562 ENCFF319QZT 218 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 218 bp overlap
ZEB2 3 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 218 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 212 bp overlap
ChIP K562 ENCFF795CMH 218 bp overlap
ZNF316 2 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 218 bp overlap
ChIP K562 ENCFF281INV 218 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 187 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 106 bp overlap