chr2 : 61,924,970 61,925,711
741 bp 28 TFs 4 linked genes
This 741 bp open chromatin element is linked to 4 target genes and is bound by 28 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
COMMD1 19.8 kb Distal Multiome
CCT4 37.0 kb Distal Multiome
FAM161A 71.4 kb Distal Multiome
B3GNT2 270.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:61,919,970 – 61,930,711
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 171 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 220 bp overlap
CTCF 14 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 240 bp overlap
ChIP GM23338 ENCFF531QOI 107 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 115 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 230 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 143 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 101 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 101 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 199 bp overlap
ChIP K562 ENCFF430KTH 374 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 91 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 78 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 204 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 166 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 412 bp overlap
ChIP DE DE-FOXA2-2 493 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 359 bp overlap
ChIP DE DE-GATA4-2 452 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 448 bp overlap
ChIP DE DE-GATA6-2 504 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 415 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 416 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 425 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 379 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 678 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 287 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCFF299RSE 241 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 349 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 189 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 140 bp overlap
PKNOX1 1 dataset
ChIP K562 ENCFF236IUS 428 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 608 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 154 bp overlap
PRDM10 3 datasets
ChIP HEK293 ENCFF145WQQ 562 bp overlap
ChIP K-562 ENCSR120MPG.PRDM10.K-562 313 bp overlap
ChIP K562 ENCFF740YLK 326 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 205 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 137 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 399 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 89 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 741 bp overlap
SMAD2_3 7 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 305 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 718 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 545 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 227 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 416 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 403 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 296 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 208 bp overlap
TBX5 2 datasets
ChIP G296S GSE85628.TBX5.G296S 408 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 408 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 205 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 138 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 200 bp overlap
XRCC5 2 datasets
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 91 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 91 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 125 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 457 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 335 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 220 bp overlap