chr2 : 36,385,480 – 36,386,120
640 bp 69 TFs 0 linked genes
This 640 bp open chromatin element has no linked target genes and is bound by 69 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:36,380,480 – 36,391,120
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
BCL6B 2 datasets
Motif DE_36h DE_36h-BCL6B_MA0731.1 17 bp overlap
Motif DE_60h DE_60h-BCL6B_MA0731.1 17 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 113 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 213 bp overlap
CTCF 12 datasets
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
Motif DE_36h DE_36h-CTCF_MA1930.2 33 bp overlap
Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap
Motif DE_60h DE_60h-CTCF_MA1930.2 33 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 629 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 516 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 199 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 445 bp overlap
ChIP keratinocyte ENCFF046PBT 58 bp overlap
ChIP keratinocyte ENCFF291YDC 56 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 214 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 195 bp overlap
E2F6 2 datasets
Motif DE_36h DE_36h-E2F6_MA0471.3 8 bp overlap
Motif DE_60h DE_60h-E2F6_MA0471.3 8 bp overlap
ELF2 1 dataset
Motif DE_36h DE_36h-ELF2_MA1483.3 10 bp overlap
ELK1::HOXA1 1 dataset
Motif DE_36h DE_36h-ELK1HOXA1_MA1931.1 14 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 333 bp overlap
ERF::FOXI1 2 datasets
Motif DE_36h DE_36h-ERFFOXI1_MA1935.2 10 bp overlap
Motif DE_60h DE_60h-ERFFOXI1_MA1935.2 10 bp overlap
ERF::FOXO1 2 datasets
Motif DE_36h DE_36h-ERFFOXO1_MA1936.2 12 bp overlap
Motif DE_60h DE_60h-ERFFOXO1_MA1936.2 12 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 310 bp overlap
ETV2::FOXI1 2 datasets
Motif DE_36h DE_36h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_60h DE_60h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::FOXI1 2 datasets
Motif DE_36h DE_36h-ETV5FOXI1_MA1946.2 12 bp overlap
Motif DE_60h DE_60h-ETV5FOXI1_MA1946.2 12 bp overlap
ETV5::FOXO1 2 datasets
Motif DE_36h DE_36h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif DE_60h DE_60h-ETV5FOXO1_MA1947.2 10 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 196 bp overlap
FEZF2 1 dataset
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
FLI1::FOXI1 2 datasets
Motif DE_36h DE_36h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_60h DE_60h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 373 bp overlap
ChIP DE DE-FOXA2-2 640 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 78 bp overlap
FOXJ2::ELF1 3 datasets
Motif DE_36h DE_36h-FOXJ2ELF1_MA1952.2 11 bp overlap
Motif DE_36h DE_36h-FOXJ2ELF1_MA1952.2 11 bp overlap
Motif DE_60h DE_60h-FOXJ2ELF1_MA1952.2 11 bp overlap
FOXO1::ELF1 2 datasets
Motif DE_36h DE_36h-FOXO1ELF1_MA1953.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 2 datasets
Motif DE_36h DE_36h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::ELK3 2 datasets
Motif DE_36h DE_36h-FOXO1ELK3_MA1955.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXO1::FLI1 2 datasets
Motif DE_36h DE_36h-FOXO1FLI1_MA1956.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1FLI1_MA1956.2 13 bp overlap
GATA1 2 datasets
Motif DE_36h DE_36h-GATA1_MA0035.5 7 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 145 bp overlap
GATA1::TAL1 1 dataset
Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 468 bp overlap
ChIP DE DE-GATA4-2 525 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 362 bp overlap
ChIP DE DE-GATA6-2 500 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 459 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 470 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 493 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 468 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 530 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 503 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 476 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMSO GSE85096.HIF1A.U2OS_trough_DMSO 277 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 316 bp overlap
Hand1::Tcf3 1 dataset
Motif DE_36h DE_36h-Hand1Tcf3_MA0092.2 9 bp overlap
IKZF1 2 datasets
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
Irf1 2 datasets
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 312 bp overlap
MEIS1 3 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MEIS2 2 datasets
Motif DE_36h DE_36h-MEIS2_MA0774.1 8 bp overlap
Motif DE_60h DE_60h-MEIS2_MA0774.1 8 bp overlap
MSANTD3 1 dataset
Motif DE_36h DE_36h-MSANTD3_MA1523.2 7 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
NR6A1 1 dataset
Motif DE_36h DE_36h-NR6A1_MA1541.2 14 bp overlap
PBX3 2 datasets
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap
PKNOX1 3 datasets
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_60h DE_60h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 3 datasets
ChIP endothelial cell of umbilical vein ENCFF303XUJ 461 bp overlap
ChIP endothelial cell of umbilical vein ENCFF303XUJ 223 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 499 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 98 bp overlap
RARA 1 dataset
Motif DE_36h DE_36h-RARA_MA0730.1 17 bp overlap
RFX4 2 datasets
Motif DE_36h DE_36h-RFX4_MA0799.3 13 bp overlap
Motif DE_60h DE_60h-RFX4_MA0799.3 13 bp overlap
Rarb 1 dataset
Motif DE_36h DE_36h-Rarb_MA0858.1 17 bp overlap
Rhox11 1 dataset
Motif DE_36h DE_36h-Rhox11_MA0629.2 9 bp overlap
SMAD2 2 datasets
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 216 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 598 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 622 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 591 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 587 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 491 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 462 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 611 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 576 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 228 bp overlap
SMARCA4 1 dataset
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 207 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 630 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 321 bp overlap
SPIC 1 dataset
Motif DE_36h DE_36h-SPIC_MA0687.2 13 bp overlap
STAT1::STAT2 2 datasets
Motif DE_36h DE_36h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap
SUPT16H 1 dataset
ChIP hiF-T GSE98758.SUPT16H.hiF-T 60 bp overlap
Stat2 2 datasets
Motif DE_36h DE_36h-Stat2_MA1623.2 10 bp overlap
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 300 bp overlap
ZFP14 2 datasets
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
Motif DE_60h DE_60h-ZFP14_MA1972.1 15 bp overlap
ZIC1 2 datasets
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
ZIC4 2 datasets
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
ZNF582 1 dataset
Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap
ZNF675 1 dataset
Motif DE_36h DE_36h-ZNF675_MA1714.2 19 bp overlap
ZNF684 1 dataset
Motif DE_36h DE_36h-ZNF684_MA1600.2 14 bp overlap
ZNF816 2 datasets
Motif DE_36h DE_36h-ZNF816_MA1719.2 15 bp overlap
Motif DE_60h DE_60h-ZNF816_MA1719.2 15 bp overlap
ZSCAN21 1 dataset
Motif DE_36h DE_36h-ZSCAN21_MA2336.1 7 bp overlap
Zic1::Zic2 2 datasets
Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 2 datasets
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Zic3 2 datasets
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap
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