chr2 : 18,078,225 – 18,078,693

468 bp 57 TFs 0 linked genes

This 468 bp open chromatin element has no linked target genes and is bound by 57 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

57 transcription factors

ARNTL 1 dataset

ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 201 bp overlap

BCL11A 2 datasets

ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 100 bp overlap

ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 96 bp overlap

BHLHE22 1 dataset

Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap

BRD4 1 dataset

ChIP Jurkat GSE83777.BRD4.Jurkat 230 bp overlap

Bhlha15 1 dataset

Motif DE_60h DE_60h-Bhlha15_MA1472.3 8 bp overlap

CRY2 1 dataset

ChIP U2OS GSE130602.CRY2.U2OS 296 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF508JZF 79 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 186 bp overlap

ERF::FOXI1 1 dataset

Motif DE_60h DE_60h-ERFFOXI1_MA1935.2 10 bp overlap

Erg 1 dataset

Motif DE_60h DE_60h-Erg_MA0474.4 10 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 385 bp overlap

ChIP DE DE-FOXA2-2 390 bp overlap

GATA1 6 datasets

ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 112 bp overlap

ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 226 bp overlap

ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 178 bp overlap

ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 166 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 164 bp overlap

ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 350 bp overlap

GATA2 3 datasets

ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 195 bp overlap

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

ChIP TF1 GSE73207.GATA2.TF1 468 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 468 bp overlap

ChIP DE DE-GATA4-2 468 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 430 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 435 bp overlap

GATA5 1 dataset

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

GATA6 15 datasets

ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 256 bp overlap

ChIP DE DE-GATA6-1 468 bp overlap

ChIP DE DE-GATA6-2 468 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 458 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 468 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 349 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 468 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 468 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 467 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 468 bp overlap

ChIP foregut GSE117136.GATA6.foregut 322 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 300 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 409 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 375 bp overlap

Gata3 1 dataset

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

IKZF2 1 dataset

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

LDB1 1 dataset

ChIP HEP GSE52637.LDB1.HEP 180 bp overlap

MYB 2 datasets

ChIP DU528 GSE94000.MYB.DU528 345 bp overlap

ChIP Loucy GSE94000.MYB.Loucy 332 bp overlap

MYF5 1 dataset

Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap

MYOD1 2 datasets

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 197 bp overlap

ChIP myoblast GSE50413.MYOD1.myoblast 226 bp overlap

Mecom 1 dataset

Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap

NCOR2 1 dataset

ChIP LS180_125 GSE39277.NCOR2.LS180_125 73 bp overlap

NEUROD1 1 dataset

Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap

NHLH2 1 dataset

Motif DE_60h DE_60h-NHLH2_MA1529.2 16 bp overlap

Neurod2 2 datasets

Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap

Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap

Olig2 1 dataset

Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap

PPARA::RXRA 1 dataset

Motif DE_60h DE_60h-PPARARXRA_MA1148.2 17 bp overlap

PROX1 1 dataset

ChIP SW480 GSE60390.PROX1.SW480 116 bp overlap

Pparg::Rxra 1 dataset

Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap

Ptf1A 1 dataset

Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap

RARA::RXRA 1 dataset

Motif DE_60h DE_60h-RARARXRA_MA0159.1 17 bp overlap

RNF2 1 dataset

ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 371 bp overlap

RUNX1 3 datasets

ChIP ME-1 GSE46044.RUNX1.ME-1 213 bp overlap

ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 342 bp overlap

ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 342 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 280 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 344 bp overlap

SMARCA4 1 dataset

ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 398 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 224 bp overlap

SPIB 1 dataset

Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap

Spi1 1 dataset

Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap

TAL1 8 datasets

ChIP CD34 GSE52924.TAL1.CD34 143 bp overlap

ChIP CHRF28811 ERP008568.TAL1.CHRF28811 303 bp overlap

ChIP K-562 GSE107726.TAL1.K-562 228 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 226 bp overlap

ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 176 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 142 bp overlap

ChIP ME-1 GSE46044.TAL1.ME-1 319 bp overlap

ChIP ProEs GSE59087.TAL1.ProEs 237 bp overlap

TEAD4 1 dataset

ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 172 bp overlap

TFAP4 1 dataset

ChIP DLD-1 GSE46935.TFAP4.DLD-1 340 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_60h DE_60h-TFAP4FLI1_MA1967.2 14 bp overlap

TRPS1 1 dataset

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

Tcf12 1 dataset

Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap

ZBTB18 1 dataset

Motif DE_60h DE_60h-ZBTB18_MA0698.2 11 bp overlap

ZBTB7A 1 dataset

ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 419 bp overlap

ZNF768 1 dataset

Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap

ZSCAN31 1 dataset

Motif DE_60h DE_60h-ZSCAN31_MA1722.2 18 bp overlap

Zfp335 1 dataset

Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap

Zfp809 1 dataset

Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap

Zic1::Zic2 1 dataset

Motif DE_60h DE_60h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap