chr20 : 22,572,443 22,572,833
390 bp 32 TFs 1 linked gene
This 390 bp open chromatin element is linked to LINC00261 and is bound by 32 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC00261 5.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:22,567,443 – 22,577,833
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AKAP8 2 datasets
ChIP HepG2 ENCFF478OVI 285 bp overlap
ChIP HepG2 ENCFF478OVI 59 bp overlap
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 218 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 157 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 188 bp overlap
CCDC6 1 dataset
ChIP HepG2 ENCFF751JSA 246 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 176 bp overlap
EZH2 3 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 160 bp overlap
ChIP GM23338 ENCFF613YON 176 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 167 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 261 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 390 bp overlap
HOXA9 1 dataset
ChIP HepG2 ENCFF214TLU 265 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 177 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 390 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 165 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 266 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 242 bp overlap
ChIP HepG2 ENCFF939HTZ 243 bp overlap
RNF2 4 datasets
ChIP H1 ENCFF239FFS 71 bp overlap
ChIP H1 ENCFF239FFS 355 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 101 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 390 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 181 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 197 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 320 bp overlap
RXRA 2 datasets
ChIP H1 ENCFF570NHK 164 bp overlap
ChIP WA01 ENCSR000BJW.RXRA.WA01 128 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 166 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF896IJG 246 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 162 bp overlap
SS18-SSX 2 datasets
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 159 bp overlap
ChIP fibroblast_W164A GSE139053.SS18-SSX.fibroblast_W164A 249 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 242 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 176 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 226 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 175 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 201 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 390 bp overlap
ZNF788P 1 dataset
ChIP HepG2 ENCFF689IBZ 243 bp overlap
ZUP1 1 dataset
ChIP HepG2 ENCFF705VKC 75 bp overlap