chr19 : 20,248,201 20,248,701
500 bp 32 TFs 2 linked genes
This 500 bp open chromatin element is linked to ENSG00000213985 and ENSG00000267383 and is bound by 32 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000213985 9.0 kb Proximal Proximity
ENSG00000267383 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:20,243,201 – 20,253,701
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AR 2 datasets
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 316 bp overlap
ChIP prostate-cancer_PDX_189-4 GSE130408.AR.prostate-cancer_PDX_189-4 67 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 158 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 156 bp overlap
FOXA1 3 datasets
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 109 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 346 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 203 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 469 bp overlap
ChIP DE DE-FOXA2-2 500 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 386 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 449 bp overlap
ChIP DE DE-GATA4-2 477 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 339 bp overlap
ChIP DE DE-GATA6-2 485 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 274 bp overlap
MXI1 1 dataset
ChIP H1 ENCFF963FZS 264 bp overlap
NANOG 6 datasets
ChIP WA01 ERP004238.NANOG.WA01 292 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 172 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 500 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 232 bp overlap
ChIP hESC GSE20650.NANOG.hESC 155 bp overlap
ChIP hESC GSE18292.NANOG.hESC 95 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 415 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POLR2A 2 datasets
ChIP thyroid gland ENCFF979LRR 482 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 387 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 317 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 284 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 326 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 235 bp overlap
SIN3A 1 dataset
ChIP H1 ENCFF896IJG 301 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 243 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 381 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 425 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 281 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 182 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 180 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 212 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 326 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
STAT3 1 dataset
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 204 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 364 bp overlap
TRERF1 1 dataset
ChIP WTC11 ENCFF113BUM 132 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP H1 ENCFF524BTL 194 bp overlap