chr17 : 55,636,293 55,636,684
391 bp 38 TFs 0 linked genes
This 391 bp open chromatin element has no linked target genes and is bound by 38 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:55,631,293 – 55,641,684
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
AR 6 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 317 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 160 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 158 bp overlap
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 213 bp overlap
ChIP prostate_P1_T GSE130408.AR.prostate_P1_T 143 bp overlap
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 336 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 370 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR000DNZ.ATF1.K-562 112 bp overlap
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 295 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 247 bp overlap
BRD4 3 datasets
ChIP BE2C GSE80151.BRD4.BE2C 59 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 59 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 391 bp overlap
CEBPG 1 dataset
ChIP K-562 ENCSR620VIC.CEBPG.K-562 114 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 174 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 164 bp overlap
FOXA1 7 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 252 bp overlap
ChIP LAPC-4_CST_V5 GSE123618.FOXA1.LAPC-4_CST_V5 259 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 183 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 200 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 196 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 313 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 191 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 227 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 135 bp overlap
ChIP DE DE-FOXA2-1 391 bp overlap
ChIP DE DE-FOXA2-2 391 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 217 bp overlap
GATA3 1 dataset
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 131 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 391 bp overlap
ChIP DE DE-GATA4-2 391 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 262 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 391 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 391 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 391 bp overlap
ChIP DE DE-GATA6-2 391 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 257 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 354 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 310 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 378 bp overlap
HOXB13 5 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 61 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 143 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 255 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 169 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 186 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 238 bp overlap
JUND 1 dataset
ChIP K562 ENCFF336RCR 312 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 76 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 218 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 160 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 391 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 391 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 196 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 254 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 391 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 324 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 326 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 194 bp overlap
ChIP K562 ENCFF059YCJ 275 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 180 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 189 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 223 bp overlap
TAL1 1 dataset
ChIP K-562 GSE107726.TAL1.K-562 216 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 220 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 391 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 226 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 337 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 345 bp overlap