chr15 : 91,140,477 91,140,966
489 bp 31 TFs 7 linked genes
This 489 bp open chromatin element is linked to 7 target genes and is bound by 31 transcription factors.
Linked Genes
7 genes
Gene Expression Dist. to TSS Distance Link type
VPS33B 118.2 kb Distal Multiome
PRC1 146.2 kb Distal Multiome
RCCD1 185.4 kb Distal Multiome
UNC45A 205.5 kb Distal Multiome
HDDC3 208.2 kb Distal Multiome
MAN2A2 238.1 kb Distal Multiome
FURIN 268.6 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:91,135,477 – 91,145,966
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 489 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 174 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CREB1 1 dataset
ChIP GM12878 ENCFF870CVH 250 bp overlap
CTCF 1 dataset
ChIP HT-1080 GSE135580.CTCF.HT-1080 57 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 444 bp overlap
EZH2 3 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 139 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 82 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 258 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 411 bp overlap
ChIP DE DE-FOXA2-2 468 bp overlap
GATA1 4 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 80 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 157 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 120 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 223 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 472 bp overlap
ChIP DE DE-GATA4-2 477 bp overlap
ChIP foregut GSE117136.GATA4.foregut 344 bp overlap
GATA6 12 datasets
ChIP AGS GSE51936.GATA6.AGS 81 bp overlap
ChIP DE DE-GATA6-1 372 bp overlap
ChIP DE DE-GATA6-2 489 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 489 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 489 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 320 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 489 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 489 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 489 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 409 bp overlap
ChIP foregut GSE117136.GATA6.foregut 380 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 290 bp overlap
HSF1 1 dataset
ChIP MO91_27A_20UM GSE45852.HSF1.MO91_27A_20UM 175 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 183 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCFF259FWL 428 bp overlap
RUNX1 5 datasets
ChIP ME-1 GSE117138.RUNX1.ME-1 170 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 207 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 207 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 170 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 178 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 240 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 483 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 467 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 270 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 323 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 489 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 489 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 248 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 314 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 318 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 478 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 264 bp overlap
TAL1 2 datasets
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 222 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 101 bp overlap
TCF7 2 datasets
ChIP GM12878 ENCFF749DPM 347 bp overlap
ChIP GM12878 ENCSR501DKS.TCF7.GM12878 154 bp overlap
TERF2 1 dataset
ChIP smooth-muscle-cell_iciHHV6 GSE121985.TERF2.smooth-muscle-cell_iciHHV6 127 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 190 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 169 bp overlap