chr15 : 88,574,676 88,575,015
339 bp 30 TFs 1 linked gene
This 339 bp open chromatin element is linked to ENSG00000259569 and is bound by 30 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000259569 6.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:88,569,676 – 88,580,015
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
BMI1 1 dataset
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 241 bp overlap
BRD4 8 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 202 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 215 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 339 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 339 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 315 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 223 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 339 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 339 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP MCF-7 ENCFF570JPP 287 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 210 bp overlap
CTCF 3 datasets
ChIP islet ERP004003.CTCF.islet 204 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 212 bp overlap
ChIP neural cell ENCFF335ADI 278 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 153 bp overlap
EP300 3 datasets
ChIP neural ENCSR843ZUP.EP300.neural 339 bp overlap
ChIP neural cell ENCFF442QNK 197 bp overlap
ChIP neural cell ENCFF442QNK 254 bp overlap
EZH2 2 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 339 bp overlap
ChIP T98G GSE112240.EZH2.T98G 339 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 184 bp overlap
MAX 3 datasets
ChIP NCI-H128 GSE41105.MAX.NCI-H128 135 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 215 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 198 bp overlap
MED1 1 dataset
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 252 bp overlap
MXI1 2 datasets
ChIP neural cell ENCFF623HQN 339 bp overlap
ChIP neural cell ENCFF623HQN 224 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 304 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 293 bp overlap
NRF1 2 datasets
ChIP K-562 ENCSR998AJK.NRF1.K-562 157 bp overlap
ChIP K562 ENCFF689EWI 226 bp overlap
PDX1 1 dataset
ChIP islet ERP001456.PDX1.islet 158 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 138 bp overlap
RAD21 2 datasets
ChIP neural ENCSR198ZYJ.RAD21.neural 339 bp overlap
ChIP neural cell ENCFF564MOT 339 bp overlap
REST 3 datasets
ChIP neural ENCSR000BTV.REST.neural 339 bp overlap
ChIP neural cell ENCFF882LXX 339 bp overlap
ChIP neural cell ENCFF882LXX 283 bp overlap
RFX1 8 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 339 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 323 bp overlap
ChIP K562 ENCFF421AVO 288 bp overlap
ChIP K562 ENCFF809XVG 224 bp overlap
ChIP MCF-7 ENCFF782EZS 339 bp overlap
ChIP MCF-7 ENCFF973QAD 304 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 339 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 248 bp overlap
SMC3 1 dataset
ChIP neural cell ENCFF795YGY 339 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 90 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 180 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 310 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 229 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 178 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 320 bp overlap
ChIP HEK293 ENCFF066NGR 254 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 336 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 137 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 217 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 155 bp overlap