chr15 : 54,481,930 – 54,482,266
336 bp 32 TFs 0 linked genes
This 336 bp open chromatin element has no linked target genes and is bound by 32 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:54,476,930 – 54,487,266
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 256 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 294 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 336 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 336 bp overlap
BRD3 1 dataset
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 160 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 99 bp overlap
CTCF 62 datasets
ChIP 81-3 ERP002246.CTCF.81-3 127 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 137 bp overlap
ChIP Caco-2 ENCFF934QYS 137 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 76 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 136 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 150 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 313 bp overlap
ChIP GM06990 ENCFF471OQT 208 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 161 bp overlap
ChIP GM12864 ENCFF357DQE 177 bp overlap
ChIP GM12865 ENCFF067GFI 193 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 168 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 108 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 189 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 99 bp overlap
ChIP GM12878 ENCFF485TGR 182 bp overlap
ChIP GM12878 ENCFF635MMB 166 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 282 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 140 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 166 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 102 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 247 bp overlap
ChIP GM23338 ENCFF772DML 143 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 87 bp overlap
ChIP H1 ENCFF230QSV 129 bp overlap
ChIP H1 ENCFF764RHO 225 bp overlap
ChIP H9 ENCFF152GTF 307 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 134 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 119 bp overlap
ChIP HepG2 ENCFF348BUL 151 bp overlap
ChIP HepG2 ENCFF757EKU 231 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 124 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 248 bp overlap
ChIP Loucy ENCFF359TVQ 289 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 263 bp overlap
ChIP MCF-7 ENCFF414SZG 158 bp overlap
ChIP MCF-7 ENCFF424NQR 154 bp overlap
ChIP MCF-7 ENCFF844STM 154 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 162 bp overlap
ChIP OCI-LY1 ENCFF455ESK 277 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 238 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 286 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 209 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 141 bp overlap
ChIP SEM GSE117864.CTCF.SEM 127 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 268 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 165 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 180 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 102 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 158 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 159 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 118 bp overlap
ChIP endodermal cell ENCFF471YCZ 162 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 220 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 134 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 112 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 137 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 287 bp overlap
ChIP islet ERP004003.CTCF.islet 150 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 199 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 144 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 114 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 123 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 79 bp overlap
EBF1 3 datasets
ChIP GM12878 ENCFF167CZS 165 bp overlap
ChIP GM12878 ENCFF813OXE 201 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 323 bp overlap
ESR1 2 datasets
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 64 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 187 bp overlap
GATAD2B 1 dataset
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 324 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 237 bp overlap
HCFC1 1 dataset
ChIP GM12878 ENCSR514VAY.HCFC1.GM12878 75 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 336 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 336 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 211 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 336 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 111 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 62 bp overlap
RAD21 16 datasets
ChIP GM12878 ENCFF046CBW 180 bp overlap
ChIP GM12878 ENCFF101UQZ 170 bp overlap
ChIP GM12878 ENCSR000EAC.RAD21.GM12878 177 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 289 bp overlap
ChIP H1 ENCFF698EWO 190 bp overlap
ChIP H1 ENCFF967OJF 189 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 199 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 105 bp overlap
ChIP HepG2 ENCFF360ZSW 153 bp overlap
ChIP HepG2 ENCFF906QIS 172 bp overlap
ChIP HepG2 ENCFF963UBJ 257 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 156 bp overlap
ChIP hiPSC_HUES9 GSE106870.RAD21.hiPSC_HUES9 137 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 243 bp overlap
ChIP lymphoblast GSE155324.RAD21.lymphoblast 260 bp overlap
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 315 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 330 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 326 bp overlap
SMARCA5 1 dataset
ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 336 bp overlap
SMC3 2 datasets
ChIP GM12878 ENCFF085RLZ 215 bp overlap
ChIP GP5D GSE51234.SMC3.GP5D 273 bp overlap
SND1 1 dataset
ChIP NHEK GSE29498.SND1.NHEK 308 bp overlap
STAG1 2 datasets
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 115 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 138 bp overlap
TCF12 2 datasets
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 206 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 72 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 136 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 140 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 169 bp overlap
ZNF687 2 datasets
ChIP GM12878 ENCFF233SGE 336 bp overlap
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 336 bp overlap
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