Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

25 transcription factors

ATRX 1 dataset

ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 110 bp overlap

BRD4 6 datasets

ChIP CLB-Ga GSE133453.BRD4.CLB-Ga 137 bp overlap

ChIP CLB-Ga_Dinaciclib GSE133453.BRD4.CLB-Ga_Dinaciclib 248 bp overlap

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 206 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 166 bp overlap

ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 168 bp overlap

ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 203 bp overlap

CHD4 1 dataset

ChIP SCMC GSE155861.CHD4.SCMC 101 bp overlap

CTCF 20 datasets

ChIP C4-2B ENCFF821XVN 69 bp overlap

ChIP CD14-positive monocyte ENCFF087XLR 123 bp overlap

ChIP CD14-positive monocyte ENCFF087XLR 275 bp overlap

ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 232 bp overlap

ChIP HCT-116 GSE131606.CTCF.HCT-116 219 bp overlap

ChIP HT-1080 GSE135580.CTCF.HT-1080 92 bp overlap

ChIP NCI-H929 ENCFF305JAB 129 bp overlap

ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 99 bp overlap

ChIP OCI-LY7 ENCFF086AXQ 167 bp overlap

ChIP Panc1 ENCFF056JQX 250 bp overlap

ChIP RWPE2 ENCFF911IEE 70 bp overlap

ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 250 bp overlap

ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 275 bp overlap

ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 204 bp overlap

ChIP chondrocyte ENCFF134ORZ 163 bp overlap

ChIP endodermal cell ENCFF471YCZ 146 bp overlap

ChIP gastrocnemius medialis ENCFF071DIF 106 bp overlap

ChIP glutamatergic neuron ENCFF816BTR 51 bp overlap

ChIP keratinocyte GSE154221.CTCF.keratinocyte 102 bp overlap

ChIP transverse colon ENCFF077CMZ 55 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 246 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-2 275 bp overlap

GATA2 5 datasets

ChIP SH-SY5Y ENCFF485YIB 275 bp overlap

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 199 bp overlap

ChIP SK-N-SH ENCFF764OZD 262 bp overlap

ChIP SK-N-SH ENCFF764OZD 231 bp overlap

ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 172 bp overlap

GATA3 3 datasets

ChIP SH-SY5Y ENCFF475HYF 275 bp overlap

ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 191 bp overlap

ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 142 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 275 bp overlap

ChIP DE DE-GATA4-2 275 bp overlap

ChIP foregut GSE117136.GATA4.foregut 245 bp overlap

GATA6 12 datasets

ChIP AGS GSE51705.GATA6.AGS 177 bp overlap

ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 150 bp overlap

ChIP DE DE-GATA6-1 275 bp overlap

ChIP DE DE-GATA6-2 275 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 275 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 275 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 275 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 275 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 275 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 275 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 275 bp overlap

ChIP foregut GSE117136.GATA6.foregut 238 bp overlap

HAND2 2 datasets

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 191 bp overlap

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 222 bp overlap

HNF1B 1 dataset

ChIP foregut GSE117136.HNF1B.foregut 171 bp overlap

ISL1 1 dataset

ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 198 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 275 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 275 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 246 bp overlap

MYCN 2 datasets

ChIP Kelly GSE94822.MYCN.Kelly 150 bp overlap

ChIP NB-1643 GSE138295.MYCN.NB-1643 227 bp overlap

PHOX2B 2 datasets

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 138 bp overlap

ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 126 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 147 bp overlap

RCOR1 1 dataset

ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 113 bp overlap

SIN3A 1 dataset

ChIP A549 ENCFF752ATT 59 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 275 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 275 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 275 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 275 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 275 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 275 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 249 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 275 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 204 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 262 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 194 bp overlap

TBX2 1 dataset

ChIP Kelly GSE94822.TBX2.Kelly 230 bp overlap

Genome Browser