chr13 : 52,834,945 52,835,662
717 bp 32 TFs 0 linked genes
This 717 bp open chromatin element has no linked target genes and is bound by 32 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:52,829,945 – 52,840,662
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 467 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 293 bp overlap
BRD4 1 dataset
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 399 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 185 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 260 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCFF829RWA 167 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 268 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 235 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 254 bp overlap
ChIP DE DE-FOXA2-2 294 bp overlap
GATA1 1 dataset
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 117 bp overlap
GATA2 4 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 141 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 469 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 136 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 260 bp overlap
GATA3 1 dataset
ChIP Kelly GSE65664.GATA3.Kelly 161 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 630 bp overlap
ChIP DE DE-GATA4-2 658 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 400 bp overlap
ChIP foregut GSE117136.GATA4.foregut 282 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 263 bp overlap
ChIP DE DE-GATA6-1 299 bp overlap
ChIP DE DE-GATA6-2 679 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 289 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 705 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 365 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 717 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 708 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 284 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 292 bp overlap
ChIP foregut GSE117136.GATA6.foregut 229 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 215 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 248 bp overlap
HSF1 1 dataset
ChIP MO91_CHX_10UM GSE45852.HSF1.MO91_CHX_10UM 234 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 64 bp overlap
ChIP SK-N-SH ENCFF285GEQ 262 bp overlap
KDM1A 1 dataset
ChIP SET-2_GSK GSE121424.KDM1A.SET-2_GSK 249 bp overlap
MYCN 1 dataset
ChIP NB-1643 GSE138295.MYCN.NB-1643 252 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 182 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 166 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 258 bp overlap
SMARCA4 5 datasets
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 193 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 225 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 250 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 717 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 219 bp overlap
SNAI2 3 datasets
ChIP SK-N-SH ENCFF449PID 318 bp overlap
ChIP SK-N-SH ENCFF449PID 117 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 288 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 62 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 99 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 99 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 271 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 291 bp overlap
ZFP3 3 datasets
ChIP SK-N-SH ENCFF981MBE 399 bp overlap
ChIP SK-N-SH ENCFF981MBE 200 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 365 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 176 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 146 bp overlap