chr13 : 51,175,033 51,175,343
310 bp 21 TFs 2 linked genes
This 310 bp open chromatin element is linked to C13orf42 and ENSG00000289894 and is bound by 21 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
C13orf42 2.6 kb Proximal Proximity
ENSG00000289894 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:51,170,033 – 51,180,343
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 310 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 162 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 208 bp overlap
BRD4 2 datasets
ChIP hESC GSE33281.BRD4.hESC 80 bp overlap
ChIP hESC GSE33281.BRD4.hESC 64 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 310 bp overlap
CTCF 1 dataset
ChIP GM23338 ENCFF772DML 148 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 245 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 80 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 190 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 160 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 170 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 310 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 54 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 120 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 271 bp overlap
ChIP GM23338 ENCFF450WCS 86 bp overlap
ChIP H1 ENCFF833NJP 310 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 113 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 131 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 107 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 235 bp overlap
TAF7 1 dataset
ChIP WA01 ENCSR000BLU.TAF7.WA01 134 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 155 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 179 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 227 bp overlap