chr13 : 36,813,292 36,813,531
239 bp 30 TFs 1 linked gene
This 239 bp open chromatin element is linked to RFXAP and is bound by 30 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RFXAP 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:36,808,292 – 36,818,531
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 239 bp overlap
ChIP K562 ENCFF938UXQ 239 bp overlap
CBFA2T3 3 datasets
ChIP K-562 GSE142227.CBFA2T3.K-562 239 bp overlap
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 239 bp overlap
ChIP K562 ENCFF673OEZ 215 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 239 bp overlap
ChIP K562 ENCFF403WPG 239 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 214 bp overlap
ChIP K562 ENCFF226VMS 239 bp overlap
GATA1 8 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 208 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 209 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 140 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 238 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 221 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 225 bp overlap
ChIP erythroblast ENCFF867JAR 220 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 161 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 239 bp overlap
ChIP K562 ENCFF544PCK 210 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 239 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 239 bp overlap
ChIP DE DE-GATA4-2 239 bp overlap
ChIP foregut GSE117136.GATA4.foregut 239 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 239 bp overlap
ChIP DE DE-GATA6-2 239 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 239 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 239 bp overlap
ChIP foregut GSE117136.GATA6.foregut 239 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 161 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 239 bp overlap
ChIP K562 ENCFF968WBH 239 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 239 bp overlap
ChIP K562 ENCFF744ALD 239 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 239 bp overlap
ChIP K562 ENCFF055GAZ 239 bp overlap
ChIP K562 ENCFF317JJX 239 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 239 bp overlap
ChIP K562 ENCFF348IBL 239 bp overlap
KDM1A 6 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 239 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 239 bp overlap
ChIP K-562 ENCSR360HRA.KDM1A.K-562 239 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 164 bp overlap
ChIP K562 ENCFF128TYE 239 bp overlap
ChIP K562 ENCFF133OLU 239 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 239 bp overlap
MECOM 1 dataset
ChIP K562 ENCFF773RGL 239 bp overlap
MEIS1 1 dataset
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 165 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 221 bp overlap
NCOR1 3 datasets
ChIP K-562 ENCSR910JAI.NCOR1.K-562 238 bp overlap
ChIP K-562 ENCSR798ILC.NCOR1.K-562 221 bp overlap
ChIP K562 ENCFF788MPU 239 bp overlap
NFIC 1 dataset
ChIP K-562 ENCSR796ITY.NFIC.K-562 239 bp overlap
NRF1 5 datasets
ChIP K-562 ENCSR998AJK.NRF1.K-562 88 bp overlap
ChIP K-562 ENCSR494TDU.NRF1.K-562 79 bp overlap
ChIP K562 ENCFF130SGK 90 bp overlap
ChIP K562 ENCFF689EWI 161 bp overlap
ChIP K562 ENCFF791UHF 167 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 239 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 239 bp overlap
TAL1 9 datasets
ChIP K-562 ENCSR000EHB.TAL1.K-562 181 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 219 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 221 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 124 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 152 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 239 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 196 bp overlap
ChIP K562 ENCFF661CCK 239 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 185 bp overlap
TBL1XR1 2 datasets
ChIP K562 ENCFF899VEC 239 bp overlap
ChIP K562 ENCFF899VEC 118 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 229 bp overlap
ChIP K562 ENCFF931DJY 239 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 209 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 239 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 220 bp overlap