chr12 : 94,290,460 – 94,290,747
287 bp 37 TFs 1 linked gene
This 287 bp open chromatin element is linked to ENSG00000258365 and is bound by 37 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000258365 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:94,285,460 – 94,295,747
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 179 bp overlap
ASCL1 2 datasets
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 120 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 151 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 203 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_BCL11A-ER-V5 GSE103445.BCL11A.HUDEP-2_BCL11A-ER-V5 247 bp overlap
BRD4 4 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 143 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 162 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 79 bp overlap
ChIP hESC GSE33281.BRD4.hESC 65 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 267 bp overlap
ChIP K562 ENCFF673OEZ 287 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 92 bp overlap
CTCF 40 datasets
ChIP BE2C ENCSR000DQD.CTCF.BE2C 134 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 182 bp overlap
ChIP GM23338 ENCFF772DML 183 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 166 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 120 bp overlap
ChIP HFFc6 ENCFF005CJI 287 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 151 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 223 bp overlap
ChIP K562 ENCFF400DFR 167 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 113 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 185 bp overlap
ChIP NB4 ENCFF155DNY 133 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 147 bp overlap
ChIP SK-N-SH ENCFF575DMG 118 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 198 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 136 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 145 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 261 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 187 bp overlap
ChIP chondrocyte ENCFF134ORZ 260 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 159 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 103 bp overlap
ChIP endodermal cell ENCFF471YCZ 287 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 147 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 124 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 137 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 284 bp overlap
ChIP heart left ventricle ENCFF354HOQ 287 bp overlap
ChIP heart right ventricle ENCFF979TCT 205 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 120 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 152 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 106 bp overlap
ChIP myotube ENCFF981UHL 249 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 181 bp overlap
ChIP neural progenitor cell ENCFF420RBO 261 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 213 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 134 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 121 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 177 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 147 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 140 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 284 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 281 bp overlap
GATA1 2 datasets
ChIP CD34_Day9_30min GSE104676.GATA1.CD34_Day9_30min 107 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 139 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 207 bp overlap
ChIP DE DE-GATA4-2 287 bp overlap
ChIP foregut GSE117136.GATA4.foregut 287 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 243 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 287 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 271 bp overlap
ChIP DE DE-GATA6-2 281 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 287 bp overlap
ChIP foregut GSE117136.GATA6.foregut 252 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 211 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 135 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 287 bp overlap
HOXB8 1 dataset
ChIP K-562 GSE121208.HOXB8.K-562 209 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 132 bp overlap
KMT2A 2 datasets
ChIP IMS-M2_VTP GSE129636.KMT2A.IMS-M2_VTP 126 bp overlap
ChIP OCI-AML-3_VTP GSE129636.KMT2A.OCI-AML-3_VTP 50 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-MORC2-KO GSE95451.MORC2.HeLa_V5-MORC2-KO 148 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 204 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 201 bp overlap
MYOD1 6 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 254 bp overlap
ChIP RD GSE137168.MYOD1.RD 207 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 182 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 287 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 160 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 157 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 224 bp overlap
NEUROG2 4 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 155 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 191 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 167 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 161 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 252 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 195 bp overlap
POLR2A 1 dataset
ChIP vagina ENCFF384GAB 287 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 210 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 77 bp overlap
ChIP SK-N-SH ENCFF747MAS 206 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 130 bp overlap
REST 2 datasets
ChIP K-562 ENCSR000BMW.REST.K-562 99 bp overlap
ChIP PFSK-1 ENCFF845VHA 247 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 191 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 203 bp overlap
SMARCA4 1 dataset
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 81 bp overlap
SMARCB1 2 datasets
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 165 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 191 bp overlap
TAL1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 143 bp overlap
TERF2 1 dataset
ChIP smooth-muscle-cell_iciHHV6 GSE121985.TERF2.smooth-muscle-cell_iciHHV6 139 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 94 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 259 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 94 bp overlap
ZNF263 1 dataset
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 122 bp overlap
ZNF28 1 dataset
ChIP HEK293T GSE78099.ZNF28.HEK293T 140 bp overlap
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