chr12 : 75,483,584 75,484,002
418 bp 32 TFs 2 linked genes
This 418 bp open chromatin element is linked to GLIPR1 and GLIPR1-AS1 and is bound by 32 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
GLIPR1 2.8 kb Proximal Proximity
GLIPR1-AS1 5.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:75,478,584 – 75,489,002
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AR 9 datasets
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 140 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 153 bp overlap
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 270 bp overlap
ChIP prostate GSE56288.AR.prostate 142 bp overlap
ChIP prostate-cancer GSE136128.AR.prostate-cancer 144 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 148 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 152 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 135 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 67 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 307 bp overlap
ASH2L 1 dataset
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 65 bp overlap
BRD1 1 dataset
ChIP RKO GSE47190.BRD1.RKO 170 bp overlap
BRD4 3 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 111 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 170 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 237 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 128 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 317 bp overlap
FOXA1 1 dataset
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 155 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 181 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-2 280 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 418 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 418 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 418 bp overlap
HOXB13 3 datasets
ChIP LNCaP GSE96652.HOXB13.LNCaP 109 bp overlap
ChIP LNCaP GSE56288.HOXB13.LNCaP 56 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 243 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 418 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 418 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 112 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 187 bp overlap
MED12 2 datasets
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 90 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 57 bp overlap
NANOG 3 datasets
ChIP LNCaP_pNanog1_Dox GSE74799.NANOG.LNCaP_pNanog1_Dox 321 bp overlap
ChIP LNCaP_pNanog8_Dox GSE74799.NANOG.LNCaP_pNanog8_Dox 114 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 363 bp overlap
NR2F2 2 datasets
ChIP liver ENCFF427MRU 164 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 95 bp overlap
PGR 1 dataset
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 185 bp overlap
POLR2A 4 datasets
ChIP sigmoid colon ENCFF725QFT 55 bp overlap
ChIP sigmoid colon ENCFF748YVT 92 bp overlap
ChIP sigmoid colon ENCFF754JQR 66 bp overlap
ChIP sigmoid colon ENCFF754JQR 267 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 155 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 418 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 418 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 418 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 418 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 234 bp overlap
SMARCA2 1 dataset
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 304 bp overlap
SMARCA4 1 dataset
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 314 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 209 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 418 bp overlap
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 108 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 151 bp overlap
SPI1 3 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 53 bp overlap
ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 193 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 159 bp overlap
STAT1 1 dataset
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 165 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 294 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 212 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 185 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 341 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 141 bp overlap