chr12 : 71,991,662 – 71,992,618
956 bp 51 TFs 0 linked genes
This 956 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:71,986,662 – 71,997,618
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
BCL6B 3 datasets
Motif DE_36h DE_36h-BCL6B_MA0731.1 17 bp overlap
Motif DE_48h DE_48h-BCL6B_MA0731.1 17 bp overlap
Motif DE_60h DE_60h-BCL6B_MA0731.1 17 bp overlap
CTCF 3 datasets
Motif DE_36h DE_36h-CTCF_MA1930.2 33 bp overlap
Motif DE_48h DE_48h-CTCF_MA1930.2 33 bp overlap
Motif DE_60h DE_60h-CTCF_MA1930.2 33 bp overlap
DUX4 4 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 232 bp overlap
DUXA 3 datasets
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
Dux 3 datasets
Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 200 bp overlap
FIGLA 3 datasets
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 321 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 377 bp overlap
ChIP DE DE-GATA4-2 582 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 436 bp overlap
ChIP DE DE-GATA6-2 448 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 406 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 431 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 409 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 466 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 464 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 467 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 373 bp overlap
Gfi1B 6 datasets
Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_48h DE_48h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_48h DE_48h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
Hmga1 1 dataset
Motif DE_48h DE_48h-Hmga1_MA2124.1 8 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 89 bp overlap
MAFF 4 datasets
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap
Motif DE_48h DE_48h-MAFF_MA0495.4 11 bp overlap
Motif DE_60h DE_60h-MAFF_MA0495.4 11 bp overlap
MEF2A 1 dataset
Motif DE_48h DE_48h-MEF2A_MA0052.5 10 bp overlap
MEF2C 1 dataset
Motif DE_48h DE_48h-MEF2C_MA0497.2 11 bp overlap
MEF2D 1 dataset
Motif DE_48h DE_48h-MEF2D_MA0773.1 12 bp overlap
MGA::EVX1 3 datasets
Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_48h DE_48h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap
Mafb 4 datasets
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
Motif DE_48h DE_48h-Mafb_MA0117.3 11 bp overlap
Motif DE_60h DE_60h-Mafb_MA0117.3 11 bp overlap
NFATC3 1 dataset
Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap
NRL 4 datasets
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap
Motif DE_48h DE_48h-NRL_MA0842.3 12 bp overlap
Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap
Nfatc1 1 dataset
Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap
Nkx2-1 1 dataset
Motif DE_48h DE_48h-Nkx2-1_MA1994.2 7 bp overlap
Nr2e3 2 datasets
Motif DE_36h DE_36h-Nr2e3_MA0164.2 6 bp overlap
Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap
PHOX2A 3 datasets
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
PROP1 3 datasets
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap
Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap
Rfx6 2 datasets
Motif DE_36h DE_36h-Rfx6_MA1724.2 9 bp overlap
Motif DE_60h DE_60h-Rfx6_MA1724.2 9 bp overlap
SCRT1 3 datasets
Motif DE_36h DE_36h-SCRT1_MA0743.3 10 bp overlap
Motif DE_48h DE_48h-SCRT1_MA0743.3 10 bp overlap
Motif DE_60h DE_60h-SCRT1_MA0743.3 10 bp overlap
SIX1 3 datasets
Motif DE_36h DE_36h-SIX1_MA1118.2 9 bp overlap
Motif DE_48h DE_48h-SIX1_MA1118.2 9 bp overlap
Motif DE_60h DE_60h-SIX1_MA1118.2 9 bp overlap
SIX2 4 datasets
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
Motif DE_36h DE_36h-SIX2_MA1119.2 11 bp overlap
Motif DE_48h DE_48h-SIX2_MA1119.2 11 bp overlap
Motif DE_60h DE_60h-SIX2_MA1119.2 11 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 437 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 392 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 275 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 521 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SREBF1 3 datasets
Motif DE_36h DE_36h-SREBF1_MA0829.3 10 bp overlap
Motif DE_48h DE_48h-SREBF1_MA0829.3 10 bp overlap
Motif DE_60h DE_60h-SREBF1_MA0829.3 10 bp overlap
Six4 3 datasets
Motif DE_36h DE_36h-Six4_MA2001.2 7 bp overlap
Motif DE_48h DE_48h-Six4_MA2001.2 7 bp overlap
Motif DE_60h DE_60h-Six4_MA2001.2 7 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TFAP2A 3 datasets
Motif DE_36h DE_36h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_48h DE_48h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_60h DE_60h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 3 datasets
Motif DE_36h DE_36h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_48h DE_48h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_60h DE_60h-TFAP2C_MA0814.3 9 bp overlap
ZBTB6 1 dataset
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
ZEB1 3 datasets
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZNF184 1 dataset
Motif DE_48h DE_48h-ZNF184_MA2120.1 13 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF384 3 datasets
Motif DE_36h DE_36h-ZNF384_MA1125.2 8 bp overlap
Motif DE_48h DE_48h-ZNF384_MA1125.2 8 bp overlap
Motif DE_60h DE_60h-ZNF384_MA1125.2 8 bp overlap
ZNF418 2 datasets
Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap
Motif DE_60h DE_60h-ZNF418_MA1980.1 15 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF479 2 datasets
ChIP HEK293T GSE78099.ZNF479.HEK293T 95 bp overlap
ChIP HEK293T GSE78099.ZNF479.HEK293T 242 bp overlap
ZNF682 3 datasets
Motif DE_36h DE_36h-ZNF682_MA1599.2 11 bp overlap
Motif DE_48h DE_48h-ZNF682_MA1599.2 11 bp overlap
Motif DE_60h DE_60h-ZNF682_MA1599.2 11 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF708 3 datasets
Motif DE_36h DE_36h-ZNF708_MA1730.2 9 bp overlap
Motif DE_48h DE_48h-ZNF708_MA1730.2 9 bp overlap
Motif DE_60h DE_60h-ZNF708_MA1730.2 9 bp overlap
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