chr12 : 22,635,107 22,635,538
431 bp 30 TFs 1 linked gene
This 431 bp open chromatin element is linked to ETNK1 and is bound by 30 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ETNK1 9.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:22,630,107 – 22,640,538
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
BRD1 1 dataset
ChIP RKO GSE47190.BRD1.RKO 119 bp overlap
BRD4 1 dataset
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 94 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 216 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRB.CREB1.A-549 142 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 262 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 200 bp overlap
EGR1 1 dataset
ChIP macrophage_D2 GSE136216.EGR1.macrophage_D2 208 bp overlap
ESR1 1 dataset
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 220 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 237 bp overlap
FOS 2 datasets
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 297 bp overlap
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 57 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 246 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 326 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 282 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 173 bp overlap
NKX3-1 1 dataset
ChIP LNCaP_ETOH GSE28264.NKX3-1.LNCaP_ETOH 189 bp overlap
NR3C1 4 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 162 bp overlap
ChIP A-549 ENCSR000BHG.NR3C1.A-549 229 bp overlap
ChIP A-549 ENCSR000BJR.NR3C1.A-549 157 bp overlap
ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 74 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF833NJP 384 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 225 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 181 bp overlap
RUVBL2 1 dataset
ChIP Huh-7 GSE97411.RUVBL2.Huh-7 316 bp overlap
SETX 1 dataset
ChIP A-549_Influenza_PR8_NS1 GSE52936.SETX.A-549_Influenza_PR8_NS1 174 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 200 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 279 bp overlap
SPI1 2 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 231 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 174 bp overlap
TP53 4 datasets
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 86 bp overlap
ChIP MOLM-13_R282W_Daunorubicin GSE131484.TP53.MOLM-13_R282W_Daunorubicin 60 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 327 bp overlap
ChIP SaOS-2 GSE15780.TP53.SaOS-2 76 bp overlap
TP63 8 datasets
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 81 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 94 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 63 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 52 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 121 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 100 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 89 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 80 bp overlap
YAP1 1 dataset
ChIP hiPSC GSE111930.YAP1.hiPSC 131 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 305 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 375 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 170 bp overlap