chr12 : 19,026,744 19,027,523
779 bp 38 TFs 0 linked genes
This 779 bp open chromatin element has no linked target genes and is bound by 38 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:19,021,744 – 19,032,523
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 248 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 147 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 221 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 275 bp overlap
ETV1 3 datasets
ChIP GIST GSE22441.ETV1.GIST 153 bp overlap
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 165 bp overlap
ChIP GIST-T1 GSE80443.ETV1.GIST-T1 144 bp overlap
EZH2 2 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 239 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 97 bp overlap
FOXA1 5 datasets
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 598 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 329 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 295 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 236 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 498 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 121 bp overlap
ChIP DE DE-FOXA2-1 637 bp overlap
ChIP DE DE-FOXA2-2 587 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 471 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 195 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 275 bp overlap
ChIP DE DE-GATA4-1 386 bp overlap
ChIP DE DE-GATA4-2 484 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 372 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 638 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 272 bp overlap
ChIP DE DE-GATA6-2 485 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 568 bp overlap
HMGA2 1 dataset
ChIP WTC11 ENCFF535JLP 100 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 249 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 219 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 298 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 183 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 658 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 691 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 479 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 267 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 219 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 721 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 550 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 190 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 409 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
RAD21 1 dataset
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 595 bp overlap
RELA 1 dataset
ChIP HeLa-B2_GRKD_DMSO GSE24518.RELA.HeLa-B2_GRKD_DMSO 102 bp overlap
SMARCA4 2 datasets
ChIP NSC GSE125033.SMARCA4.NSC 146 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 291 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 299 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 261 bp overlap
SMC1 1 dataset
ChIP HAP1 GSE94992.SMC1.HAP1 312 bp overlap
SNAI2 2 datasets
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 263 bp overlap
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 259 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 454 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 180 bp overlap
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 173 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 313 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 210 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 172 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 292 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 204 bp overlap
ZBTB11 1 dataset
ChIP HEK293 ENCFF262GZJ 133 bp overlap
ZKSCAN2 1 dataset
ChIP HEK293T GSE78099.ZKSCAN2.HEK293T 181 bp overlap
ZNF34 2 datasets
ChIP HEK293 ENCFF481TFV 100 bp overlap
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 74 bp overlap
ZNF555 1 dataset
ChIP HEK293 ENCFF406QFI 65 bp overlap