chr11 : 116,034,060 116,034,438
378 bp 42 TFs 0 linked genes
This 378 bp open chromatin element has no linked target genes and is bound by 42 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:116,029,060 – 116,039,438
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
ARNTL 2 datasets
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 70 bp overlap
ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 376 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 302 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BRD4 2 datasets
ChIP SW480 GSE110473.BRD4.SW480 283 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 378 bp overlap
CTNNB1 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 292 bp overlap
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 360 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 172 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 210 bp overlap
EP300 3 datasets
ChIP neural ENCSR843ZUP.EP300.neural 69 bp overlap
ChIP upper lobe of left lung ENCFF024QBJ 163 bp overlap
ChIP upper lobe of left lung ENCFF306FRW 331 bp overlap
FOXA1 2 datasets
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 316 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 364 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 361 bp overlap
ChIP DE DE-FOXA2-2 378 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 250 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 338 bp overlap
ChIP DE DE-GATA4-2 378 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 378 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 270 bp overlap
ChIP DE DE-GATA6-2 367 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 378 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 378 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 378 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 378 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 378 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 232 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 377 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 378 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 305 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 378 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 378 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 378 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 378 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 349 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MAX 1 dataset
ChIP NCI-H128 GSE41105.MAX.NCI-H128 322 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 279 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 198 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 259 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 285 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 342 bp overlap
NKX2-1 2 datasets
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 189 bp overlap
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 349 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 198 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 378 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 196 bp overlap
RELA 1 dataset
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 306 bp overlap
REST 1 dataset
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 362 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 286 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 158 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 307 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 378 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 378 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 325 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 362 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 378 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 168 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 274 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 309 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 179 bp overlap
SPDEF 1 dataset
ChIP A-549 GSE86957.SPDEF.A-549 239 bp overlap
SPI1 1 dataset
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 100 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 154 bp overlap
TP53 1 dataset
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 326 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 233 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap