chr11:94,351,024–94,351,644

chr11 : 94,351,024 – 94,351,644

620 bp 45 TFs 5 linked genes

This 620 bp open chromatin element is linked to 5 target genes and is bound by 45 transcription factors.

Linked Genes

5 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000250519		113.1 kb	Distal	Multiome
MRE11		142.5 kb	Distal	Multiome
ANKRD49		142.7 kb	Distal	Multiome
PANX1		222.3 kb	Distal	Multiome
LINC02700		286.8 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

45 transcription factors

Bach1::Mafk 2 datasets

Motif DE_36h DE_36h-Bach1Mafk_MA0591.2 12 bp overlap

Motif DE_48h DE_48h-Bach1Mafk_MA0591.2 12 bp overlap

CDX1 3 datasets

Motif DE_36h DE_36h-CDX1_MA0878.3 10 bp overlap

Motif DE_48h DE_48h-CDX1_MA0878.3 10 bp overlap

Motif DE_60h DE_60h-CDX1_MA0878.3 10 bp overlap

CDX2 3 datasets

Motif DE_36h DE_36h-CDX2_MA0465.3 8 bp overlap

Motif DE_48h DE_48h-CDX2_MA0465.3 8 bp overlap

Motif DE_60h DE_60h-CDX2_MA0465.3 8 bp overlap

CDX4 3 datasets

Motif DE_36h DE_36h-CDX4_MA1473.2 9 bp overlap

Motif DE_48h DE_48h-CDX4_MA1473.2 9 bp overlap

Motif DE_60h DE_60h-CDX4_MA1473.2 9 bp overlap

FIGLA 3 datasets

Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap

Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap

Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap

FOSL1::JUND 3 datasets

Motif DE_36h DE_36h-FOSL1JUND_MA1142.2 8 bp overlap

Motif DE_48h DE_48h-FOSL1JUND_MA1142.2 8 bp overlap

Motif DE_60h DE_60h-FOSL1JUND_MA1142.2 8 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 368 bp overlap

GATA2 2 datasets

Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap

Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 554 bp overlap

ChIP DE DE-GATA4-2 564 bp overlap

Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

GATA5 2 datasets

Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap

Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 462 bp overlap

ChIP DE DE-GATA6-2 564 bp overlap

Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap

Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 545 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 492 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 588 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 529 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 288 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 297 bp overlap

Gata3 2 datasets

Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap

Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap

HOXA10 3 datasets

Motif DE_36h DE_36h-HOXA10_MA0899.2 9 bp overlap

Motif DE_48h DE_48h-HOXA10_MA0899.2 9 bp overlap

Motif DE_60h DE_60h-HOXA10_MA0899.2 9 bp overlap

HOXB13 1 dataset

Motif DE_48h DE_48h-HOXB13_MA0901.3 9 bp overlap

HOXD9 3 datasets

Motif DE_36h DE_36h-HOXD9_MA0913.3 9 bp overlap

Motif DE_48h DE_48h-HOXD9_MA0913.3 9 bp overlap

Motif DE_60h DE_60h-HOXD9_MA0913.3 9 bp overlap

Hmx1 3 datasets

Motif DE_36h DE_36h-Hmx1_MA0896.2 9 bp overlap

Motif DE_48h DE_48h-Hmx1_MA0896.2 9 bp overlap

Motif DE_60h DE_60h-Hmx1_MA0896.2 9 bp overlap

Hoxa13 4 datasets

Motif DE_36h DE_36h-Hoxa13_MA0650.4 8 bp overlap

Motif DE_48h DE_48h-Hoxa13_MA0650.4 8 bp overlap

Motif DE_48h DE_48h-Hoxa13_MA0650.4 8 bp overlap

Motif DE_60h DE_60h-Hoxa13_MA0650.4 8 bp overlap

Hoxd13 3 datasets

Motif DE_36h DE_36h-Hoxd13_MA0909.4 7 bp overlap

Motif DE_48h DE_48h-Hoxd13_MA0909.4 7 bp overlap

Motif DE_60h DE_60h-Hoxd13_MA0909.4 7 bp overlap

ChIP DE_D1 S08-DE-d1-JUN-exp1 457 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 435 bp overlap

KLF13 1 dataset

Motif DE_48h DE_48h-KLF13_MA0657.2 17 bp overlap

Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap

NR2F1 1 dataset

Motif DE_60h DE_60h-NR2F1_MA0017.3 12 bp overlap

Nfat5 1 dataset

Motif DE_48h DE_48h-Nfat5_MA0606.3 8 bp overlap

Nfatc2 1 dataset

Motif DE_48h DE_48h-Nfatc2_MA0152.3 8 bp overlap

Nr2F6 1 dataset

Motif DE_60h DE_60h-Nr2F6_MA0728.1 15 bp overlap

Nr2e3 3 datasets

Motif DE_36h DE_36h-Nr2e3_MA0164.2 6 bp overlap

Motif DE_48h DE_48h-Nr2e3_MA0164.2 6 bp overlap

Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap

PROX1 1 dataset

ChIP SW480 GSE60390.PROX1.SW480 85 bp overlap

RXRA::VDR 1 dataset

Motif DE_60h DE_60h-RXRAVDR_MA0074.1 15 bp overlap

Motif DE_60h DE_60h-Rarg_MA0859.2 15 bp overlap

Runx1 2 datasets

Motif DE_48h DE_48h-Runx1_MA0002.3 9 bp overlap

Motif DE_60h DE_60h-Runx1_MA0002.3 9 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 527 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 394 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 495 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 362 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 286 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 326 bp overlap

SOX10 3 datasets

Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap

Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap

Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 264 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 426 bp overlap

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 215 bp overlap

Motif DE_48h DE_48h-TBP_MA0108.3 7 bp overlap

TCF7L2 1 dataset

Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap

TFAP4::ETV1 2 datasets

Motif DE_36h DE_36h-TFAP4ETV1_MA1966.2 13 bp overlap

Motif DE_60h DE_60h-TFAP4ETV1_MA1966.2 13 bp overlap

TRPS1 2 datasets

Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap

Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap

Motif DE_60h DE_60h-Wt1_MA1627.2 10 bp overlap

Motif DE_48h DE_48h-Yy1_MA0095.4 8 bp overlap

ZEB1 3 datasets

Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap

Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap

Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap

ZNF418 3 datasets

Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap

Motif DE_48h DE_48h-ZNF418_MA1980.1 15 bp overlap

Motif DE_60h DE_60h-ZNF418_MA1980.1 15 bp overlap

ZNF707 1 dataset

Motif DE_60h DE_60h-ZNF707_MA1715.1 15 bp overlap