chr11 : 35,946,637 35,947,106
469 bp 32 TFs 1 linked gene
This 469 bp open chromatin element is linked to LDLRAD3 and is bound by 32 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LDLRAD3 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:35,941,637 – 35,952,106
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 372 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 102 bp overlap
BRD4 4 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 313 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 302 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 469 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 409 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 281 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 308 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 469 bp overlap
ChIP DE DE-FOXA2-2 456 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 469 bp overlap
ChIP DE DE-GATA4-2 391 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 388 bp overlap
ChIP DE DE-GATA6-2 341 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 379 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 351 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 369 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 469 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 449 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 388 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 421 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 419 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 437 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 228 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 155 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 232 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 224 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 204 bp overlap
RELA 1 dataset
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 347 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 253 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 427 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 335 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 469 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 469 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 282 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 335 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 289 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 469 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 350 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 180 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 243 bp overlap
TCF7L2 8 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 329 bp overlap
ChIP HCT116 ENCFF038POZ 359 bp overlap
ChIP HEK293 ENCFF513JQN 392 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 348 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 322 bp overlap
ChIP PANC-1 ENCSR000EXL.TCF7L2.PANC-1 248 bp overlap
ChIP Panc1 ENCFF829HHL 469 bp overlap
ChIP Panc1 ENCFF829HHL 91 bp overlap
TP53 2 datasets
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 259 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 418 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 282 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 244 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 164 bp overlap
ZNF264 1 dataset
ChIP HEK293 GSE76494.ZNF264.HEK293 151 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 222 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 187 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 244 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 424 bp overlap
ZNF695 1 dataset
ChIP HEK293T GSE78099.ZNF695.HEK293T 172 bp overlap