Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

35 transcription factors

APC 1 dataset

ChIP HCT-116 GSE103894.APC.HCT-116 251 bp overlap

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 246 bp overlap

BRD4 1 dataset

ChIP HAP1 GSE108387.BRD4.HAP1 416 bp overlap

CTCF 46 datasets

ChIP GM12872 ENCFF697BYI 240 bp overlap

ChIP GP5D GSE51234.CTCF.GP5D 362 bp overlap

ChIP H1 ENCFF230QSV 165 bp overlap

ChIP H1 ENCFF414GZI 213 bp overlap

ChIP H1 ENCFF764RHO 251 bp overlap

ChIP H9 ENCFF152GTF 143 bp overlap

ChIP HAP1 GSE152721.CTCF.HAP1 270 bp overlap

ChIP HAP1 GSE94992.CTCF.HAP1 248 bp overlap

ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 230 bp overlap

ChIP HAP1_SCC4KO GSE94992.CTCF.HAP1_SCC4KO 188 bp overlap

ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 275 bp overlap

ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 238 bp overlap

ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 314 bp overlap

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 279 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 219 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 297 bp overlap

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 245 bp overlap

ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 293 bp overlap

ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 240 bp overlap

ChIP HEK293 ENCSR000DTW.CTCF.HEK293 102 bp overlap

ChIP HL-60 GSE131577.CTCF.HL-60 154 bp overlap

ChIP Hep-G2 ERP000209.CTCF.Hep-G2 155 bp overlap

ChIP Loucy ENCFF359TVQ 369 bp overlap

ChIP Loucy ENCSR464DKE.CTCF.Loucy 231 bp overlap

ChIP MCF-7 ENCFF139NQI 277 bp overlap

ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 252 bp overlap

ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 175 bp overlap

ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 161 bp overlap

ChIP WA01 ENCSR000DLK.CTCF.WA01 131 bp overlap

ChIP endodermal cell ENCFF471YCZ 341 bp overlap

ChIP esophagus squamous epithelium ENCFF037IYT 303 bp overlap

ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 266 bp overlap

ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 254 bp overlap

ChIP hESC_D0 GSE116862.CTCF.hESC_D0 168 bp overlap

ChIP hepatocyte ENCFF263BLJ 190 bp overlap

ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 232 bp overlap

ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 243 bp overlap

ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 224 bp overlap

ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 168 bp overlap

ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 141 bp overlap

ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 307 bp overlap

ChIP keratinocyte GSE154221.CTCF.keratinocyte 229 bp overlap

ChIP neural ENCSR822CEA.CTCF.neural 245 bp overlap

ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 148 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 242 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 324 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF364PUR 321 bp overlap

E2F6 2 datasets

ChIP H1 ENCFF785DWK 221 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 226 bp overlap

ESR1 1 dataset

ChIP breast_tumor_Male_4 GSE104399.ESR1.breast_tumor_Male_4 97 bp overlap

ESR1_Y537C 1 dataset

ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 70 bp overlap

EZH2 1 dataset

ChIP DND41 ENCSR000ASW.EZH2.DND41 122 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 50 bp overlap

HNF4A 2 datasets

ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 113 bp overlap

ChIP GP5D GSE51234.HNF4A.GP5D 347 bp overlap

KLF1 1 dataset

Motif ES_0h ES_0h-KLF1_MA0493.3 8 bp overlap

KLF2 1 dataset

Motif ES_0h ES_0h-KLF2_MA1515.2 8 bp overlap

KLF4 3 datasets

Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap

ChIP HAP1 GSE130417.KLF4.HAP1 170 bp overlap

ChIP hiPSC GSE56567.KLF4.hiPSC 123 bp overlap

KLF5 1 dataset

Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap

MAX 2 datasets

ChIP H1 ENCFF601FOM 157 bp overlap

ChIP H1 ENCFF914VQY 52 bp overlap

MYC 1 dataset

ChIP CD34 GSE85488.MYC.CD34 113 bp overlap

NANOG 1 dataset

ChIP WA09 GSE105028.NANOG.WA09 164 bp overlap

NEUROD1 1 dataset

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 166 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 109 bp overlap

POU5F1 2 datasets

ChIP NCCIT GSE36134.POU5F1.NCCIT 209 bp overlap

ChIP SKM-1 GSE93706.POU5F1.SKM-1 294 bp overlap

RAD21 3 datasets

ChIP HAP1 GSE152721.RAD21.HAP1 246 bp overlap

ChIP HAP1 GSE126634.RAD21.HAP1 218 bp overlap

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 341 bp overlap

RBPJ 2 datasets

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 135 bp overlap

Spi1 2 datasets

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap

TP53 1 dataset

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 395 bp overlap

TRIM28 2 datasets

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 416 bp overlap

ChIP hESC GSE115387.TRIM28.hESC 230 bp overlap

ZNF143 1 dataset

ChIP WA01 ENCSR000EBW.ZNF143.WA01 131 bp overlap

ZNF213 1 dataset

Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap

ZNF449 1 dataset

Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap

ZNF547 4 datasets

ChIP HEK293 ENCFF693MRM 204 bp overlap

ChIP HEK293 ENCSR909TSW.ZNF547.HEK293 270 bp overlap

ChIP HEK293 GSE76494.ZNF547.HEK293 119 bp overlap

ChIP HEK293T GSE78099.ZNF547.HEK293T 182 bp overlap

ZNF586 1 dataset

ChIP HEK293 GSE76494.ZNF586.HEK293 119 bp overlap

ZNF75D 2 datasets

Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap

Motif ES_0h ES_0h-ZNF75D_MA1601.2 12 bp overlap

ZNF766 2 datasets

Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap

Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap

Zfp335 1 dataset

Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap

Genome Browser