chr1 : 18,354,636 – 18,354,923
287 bp 51 TFs 0 linked genes
This 287 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:18,349,636 – 18,359,923
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
AR 34 datasets
ChIP LNCaP GSE43720.AR.LNCaP 287 bp overlap
ChIP LNCaP GSE110655.AR.LNCaP 182 bp overlap
ChIP LNCaP GSE94682.AR.LNCaP 158 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 211 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 50 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 181 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 242 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 191 bp overlap
ChIP LNCaP_GFP_shFOXA1_Ethanol GSE128883.AR.LNCaP_GFP_shFOXA1_Ethanol 243 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 112 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 179 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 194 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 196 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 93 bp overlap
ChIP VCaP GSE148358.AR.VCaP 236 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 287 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 103 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 287 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 274 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 138 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 151 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 157 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 139 bp overlap
ChIP VCaP_R1881_10C30 GSE32892.AR.VCaP_R1881_10C30 102 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 139 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 120 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 154 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 152 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 130 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 77 bp overlap
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 123 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 194 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 139 bp overlap
ChIP prostate_P7_T GSE130408.AR.prostate_P7_T 129 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 189 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 194 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 173 bp overlap
CREB1 1 dataset
ChIP HepG2 ENCFF576ERP 83 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 154 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 277 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 141 bp overlap
ERF 3 datasets
ChIP VCaP GSE98809.ERF.VCaP 210 bp overlap
ChIP VCaP_DOX GSE98809.ERF.VCaP_DOX 226 bp overlap
ChIP VCaP_DOX GSE83650.ERF.VCaP_DOX 176 bp overlap
ERG 10 datasets
ChIP VCaP GSE83650.ERG.VCaP 287 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 287 bp overlap
ChIP VCaP GSE28950.ERG.VCaP 95 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 116 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 145 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 200 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 155 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 163 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 272 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 223 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 194 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 194 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 135 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 287 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 136 bp overlap
FOXA1 52 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 144 bp overlap
ChIP HepG2 ENCFF207NVJ 176 bp overlap
ChIP HepG2 ENCFF740VZW 115 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 240 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 187 bp overlap
ChIP LNCaP-C4-2B_DHT GSE40050.FOXA1.LNCaP-C4-2B_DHT 167 bp overlap
ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 200 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 132 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 133 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 161 bp overlap
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 209 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 239 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 284 bp overlap
ChIP LNCaP_FA GSE114737.FOXA1.LNCaP_FA 154 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 160 bp overlap
ChIP LNCaP_S2101-48H GSE114266.FOXA1.LNCaP_S2101-48H 208 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 121 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 181 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 175 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 144 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 95 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 236 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 167 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 131 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 118 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 142 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 149 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 95 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 190 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 135 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 216 bp overlap
ChIP MCF-7_JC4694 GSE126004.FOXA1.MCF-7_JC4694 125 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 152 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 155 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 182 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 196 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 191 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 142 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 287 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 167 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 185 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 113 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 126 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 172 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 176 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 207 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 206 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 137 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 194 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 140 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 287 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 215 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 287 bp overlap
ChIP DE DE-FOXA2-2 287 bp overlap
ChIP HepG2 ENCFF533COJ 206 bp overlap
GATA2 3 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 162 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 162 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 175 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 287 bp overlap
ChIP DE DE-GATA4-2 287 bp overlap
ChIP foregut GSE117136.GATA4.foregut 214 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 164 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 183 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 287 bp overlap
ChIP DE DE-GATA6-2 287 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 287 bp overlap
ChIP foregut GSE117136.GATA6.foregut 263 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 228 bp overlap
HDAC3 2 datasets
ChIP VCaP_DHAT_2H GSE28950.HDAC3.VCaP_DHAT_2H 116 bp overlap
ChIP VCaP_ETOH GSE28950.HDAC3.VCaP_ETOH 144 bp overlap
HOXB13 9 datasets
ChIP prostate-cancer_PDX_189-4 GSE130408.HOXB13.prostate-cancer_PDX_189-4 99 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 164 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 128 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 143 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 168 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 178 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 211 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 207 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 287 bp overlap
KDM1A 3 datasets
ChIP H1 ENCFF696SGD 122 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 124 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 107 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 200 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 137 bp overlap
MAFF 2 datasets
ChIP HepG2 ENCFF452YUT 185 bp overlap
ChIP K562 ENCFF071YKK 171 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 249 bp overlap
ChIP K562 ENCFF455EEO 287 bp overlap
MAFK 4 datasets
ChIP A549 ENCFF371EPR 238 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 125 bp overlap
ChIP HepG2 ENCFF743ZOF 162 bp overlap
ChIP HepG2 ENCFF767LDG 193 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 250 bp overlap
NKX3-1 1 dataset
ChIP LNCaP_DHT GSE28264.NKX3-1.LNCaP_DHT 121 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 287 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 120 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 287 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 65 bp overlap
POLR2A 1 dataset
ChIP SK-N-MC ENCFF088IVG 278 bp overlap
RELA 2 datasets
ChIP LNCaP_DHT_TNFA GSE83860.RELA.LNCaP_DHT_TNFA 221 bp overlap
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 214 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 287 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 287 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 287 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 287 bp overlap
SOX13 1 dataset
ChIP Hep-G2 ENCSR445ACU.SOX13.Hep-G2 161 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 278 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 287 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 150 bp overlap
SOX6 1 dataset
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 218 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 57 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 96 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 277 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 240 bp overlap
ZMYM3 2 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 118 bp overlap
ChIP K562 ENCFF361LXT 71 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 276 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 63 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 120 bp overlap
ZNF629 1 dataset
ChIP HepG2 ENCFF490FFQ 87 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 104 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 172 bp overlap
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