chr9 : 967,082 967,245
163 bp 27 TFs 1 linked gene
This 163 bp open chromatin element is linked to DMRT3 and is bound by 27 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
DMRT3 9.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:962,082 – 972,245
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 81 bp overlap
BRD4 2 datasets
ChIP NMC24335 GSE96775.BRD4.NMC24335 163 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 149 bp overlap
CBX7 4 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 109 bp overlap
ChIP hESC GSE133412.CBX7.hESC 129 bp overlap
ChIP hESC_QKO GSE133412.CBX7.hESC_QKO 150 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 163 bp overlap
CBX8 1 dataset
ChIP A-549 ENCSR616MOB.CBX8.A-549 71 bp overlap
CEBPA 4 datasets
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 163 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 163 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 163 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 62 bp overlap
CEBPB 1 dataset
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 78 bp overlap
EZH2 5 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 163 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 163 bp overlap
ChIP OCI-LY7 ENCFF395KPU 163 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 163 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 163 bp overlap
GATA6 3 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 163 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 163 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 125 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 163 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 112 bp overlap
MAX 1 dataset
ChIP NB4 ENCFF966MWB 151 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 163 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 163 bp overlap
PCGF2 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 163 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 163 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 162 bp overlap
RARA 2 datasets
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 118 bp overlap
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 88 bp overlap
RNF2 2 datasets
ChIP GM12878 ENCSR679FAB.RNF2.GM12878 71 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 56 bp overlap
RUNX1 1 dataset
ChIP NB4 GSE81992.RUNX1.NB4 163 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 163 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 163 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 163 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 163 bp overlap
SPI1 3 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 132 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 163 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 119 bp overlap
SUZ12 3 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 57 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 151 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 163 bp overlap
VDR 3 datasets
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 163 bp overlap
ChIP THP-1_2h_1-25-OH-2D3 GSE89431.VDR.THP-1_2h_1-25-OH-2D3 154 bp overlap
ChIP THP-1_EtOH_1d GSE89431.VDR.THP-1_EtOH_1d 163 bp overlap
ZBTB16 1 dataset
ChIP KG-1_shEZH2 GSE109619.ZBTB16.KG-1_shEZH2 163 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 163 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 133 bp overlap