Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

37 transcription factors

AR 2 datasets

ChIP LNCaP_L388M_shFOXA1_Ethanol GSE128883.AR.LNCaP_L388M_shFOXA1_Ethanol 226 bp overlap

ChIP endometrial-stromal-cell GSE119432.AR.endometrial-stromal-cell 176 bp overlap

ARNTL 1 dataset

ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 268 bp overlap

CRY1 1 dataset

ChIP U2OS_cordycepin GSE130506.CRY1.U2OS_cordycepin 255 bp overlap

Crx 3 datasets

Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap

Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

DUX4 1 dataset

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 214 bp overlap

ESR1 1 dataset

ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 217 bp overlap

ETV5::HOXA2 1 dataset

Motif DE_60h DE_60h-ETV5HOXA2_MA1948.2 12 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 505 bp overlap

ChIP DE DE-FOXA2-2 453 bp overlap

GATA2 1 dataset

ChIP WA09 GSE105081.GATA2.WA09 192 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 575 bp overlap

ChIP DE DE-GATA4-2 584 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 381 bp overlap

ChIP foregut GSE117136.GATA4.foregut 340 bp overlap

GATA6 12 datasets

ChIP DE DE-GATA6-1 493 bp overlap

ChIP DE DE-GATA6-2 454 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 483 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 618 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 474 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 514 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 626 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 491 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 377 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 343 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 475 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 258 bp overlap

GSC 3 datasets

Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap

Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

GSC2 3 datasets

Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap

Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

ISL2 1 dataset

Motif DE_60h DE_60h-ISL2_MA0914.2 6 bp overlap

Irf1 1 dataset

Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap

KLF5 1 dataset

ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 291 bp overlap

MGA::EVX1 1 dataset

Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 282 bp overlap

Nkx3-2 1 dataset

Motif DE_60h DE_60h-Nkx3-2_MA0122.4 10 bp overlap

OTX1 3 datasets

Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap

Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

PHOX2B 1 dataset

Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap

PITX1 3 datasets

Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap

Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

PITX3 3 datasets

Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap

Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

PPARG 1 dataset

Motif DE_60h DE_60h-PPARG_MA0066.2 19 bp overlap

RHOXF1 3 datasets

Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap

Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

RUNX1 2 datasets

ChIP Jurkat GSE68976.RUNX1.Jurkat 193 bp overlap

ChIP Jurkat GSE76181.RUNX1.Jurkat 193 bp overlap

SIX2 2 datasets

ChIP HEK GSE73865.SIX2.HEK 433 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 232 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 320 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 308 bp overlap

SMAD2_3 2 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 414 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 305 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 205 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 220 bp overlap

TCF7L2 1 dataset

ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 257 bp overlap

ZBTB26 1 dataset

Motif DE_60h DE_60h-ZBTB26_MA1579.2 8 bp overlap

ZNF285 1 dataset

ChIP HEK293T GSE78099.ZNF285.HEK293T 294 bp overlap

ZNF354A 1 dataset

Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap

ZNF85 3 datasets

Motif DE_36h DE_36h-ZNF85_MA1720.2 12 bp overlap

Motif DE_48h DE_48h-ZNF85_MA1720.2 12 bp overlap

Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap

Genome Browser