Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

34 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 192 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 192 bp overlap

BRD4 5 datasets

ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 171 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 192 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 192 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 192 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-pos 158 bp overlap

CDK9 2 datasets

ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 192 bp overlap

ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 176 bp overlap

CHD7 2 datasets

ChIP WA01 ENCSR000AVA.CHD7.WA01 128 bp overlap

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 192 bp overlap

CTCF 1 dataset

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 108 bp overlap

EP300 1 dataset

ChIP neural cell ENCFF442QNK 192 bp overlap

GATA6 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 192 bp overlap

KDM1A 1 dataset

ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 192 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 192 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 192 bp overlap

NOTCH1 1 dataset

ChIP HPBALL GSE39263.NOTCH1.HPBALL 139 bp overlap

POLR2A 3 datasets

ChIP esophagus muscularis mucosa ENCFF759BBR 192 bp overlap

ChIP neural cell ENCFF604SPB 111 bp overlap

ChIP sigmoid colon ENCFF754JQR 192 bp overlap

POU1F1 1 dataset

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

POU2F1 1 dataset

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

POU2F2 1 dataset

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 192 bp overlap

POU3F1 1 dataset

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap

POU3F4 1 dataset

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 138 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 192 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 130 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 121 bp overlap

POU5F1B 1 dataset

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

RAD21 5 datasets

ChIP HAP1 GSE126634.RAD21.HAP1 192 bp overlap

ChIP HAP1 GSE152721.RAD21.HAP1 192 bp overlap

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 192 bp overlap

ChIP neural ENCSR198ZYJ.RAD21.neural 192 bp overlap

ChIP neural cell ENCFF564MOT 192 bp overlap

RELA 1 dataset

ChIP HeLa-B2_GRKD_DMSO GSE24518.RELA.HeLa-B2_GRKD_DMSO 192 bp overlap

REST 2 datasets

ChIP neural ENCSR000BTV.REST.neural 160 bp overlap

ChIP neural cell ENCFF882LXX 192 bp overlap

RUNX1 2 datasets

ChIP Jurkat GSE76181.RUNX1.Jurkat 188 bp overlap

ChIP Jurkat GSE68976.RUNX1.Jurkat 148 bp overlap

SMARCA4 5 datasets

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 192 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 192 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 192 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 192 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 192 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 192 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 192 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 192 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 192 bp overlap

SMC3 2 datasets

ChIP neural ENCSR404BPV.SMC3.neural 192 bp overlap

ChIP neural cell ENCFF795YGY 192 bp overlap

SOX2 3 datasets

ChIP HNSC GSE69479.SOX2.HNSC 192 bp overlap

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 163 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 192 bp overlap

TAF1 1 dataset

ChIP neural ENCSR000BTX.TAF1.neural 157 bp overlap

TAL1 1 dataset

ChIP MOLT-3 GSE59657.TAL1.MOLT-3 96 bp overlap

Genome Browser